Detailed information    

insolico Bioinformatically predicted

Overview


Name   pptB   Type   Regulator
Locus tag   C9Q_RS07630 Genome accession   NZ_CP067090
Coordinates   1458820..1459854 (-) Length   344 a.a.
NCBI ID   WP_010922583.1    Uniprot ID   A0A0H2UWB0
Organism   Streptococcus pyogenes MGAS10870     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1453820..1464854
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C9Q_RS07595 (C9Q_07550) - 1454596..1454898 (-) 303 WP_002983488.1 YlxQ-related RNA-binding protein -
  C9Q_RS07600 (C9Q_07555) - 1454891..1455187 (-) 297 WP_002983486.1 YlxR family protein -
  C9Q_RS07605 (C9Q_07560) nusA 1455203..1456360 (-) 1158 WP_002994325.1 transcription termination factor NusA -
  C9Q_RS07610 (C9Q_07565) rimP 1456535..1457071 (-) 537 WP_011054929.1 ribosome maturation factor RimP -
  C9Q_RS07620 (C9Q_07575) trmB 1457330..1457965 (-) 636 WP_002983387.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  C9Q_RS07625 (C9Q_07580) - 1457965..1458756 (-) 792 WP_002983385.1 phosphotransferase family protein -
  C9Q_RS07630 (C9Q_07585) pptB 1458820..1459854 (-) 1035 WP_010922583.1 ABC transporter permease Regulator
  C9Q_RS07635 (C9Q_07590) pptA 1459857..1460582 (-) 726 WP_002983379.1 ABC transporter ATP-binding protein Regulator
  C9Q_RS07640 (C9Q_07595) - 1460654..1461073 (+) 420 WP_002983376.1 HIT family protein -
  C9Q_RS07645 (C9Q_07600) - 1461070..1461426 (+) 357 WP_002988657.1 hypothetical protein -
  C9Q_RS07650 (C9Q_07605) - 1461537..1462820 (-) 1284 WP_002994335.1 LCP family protein -
  C9Q_RS07655 (C9Q_07610) - 1462829..1463353 (-) 525 WP_002983369.1 N-acetyltransferase -
  C9Q_RS07660 (C9Q_07615) tsaE 1463328..1463789 (-) 462 WP_002983367.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -

Sequence


Protein


Download         Length: 344 a.a.        Molecular weight: 40274.52 Da        Isoelectric Point: 10.3713

>NTDB_id=457095 C9Q_RS07630 WP_010922583.1 1458820..1459854(-) (pptB) [Streptococcus pyogenes MGAS10870]
MKALFLKRRQDFQKQQNKYLRYVLNDHFVLVLMFLLGFAMVQYGQLLNHFPTNHLPIQVCLGILIPLLLSMGSIATYLEE
ADQHFLLPKEEEVISYIKQAERLSFLLWGTLQTAVLLFLYPIFRRLGLSLFIFIILVLILLALKRVVLSRKTRYFLRGNR
LDWAKAVAFESNRKQSILKFYSLFTTVKGISTKVKERTYLNPLLKLVKQTPSNLWLSLYARAFLRSSDYLGLFLRLMLLS
SLSVFFIHNLYLSVSLALIFNYLVVFQLLSLYYHYDYHYMTSLYPENSRSKKKNMLSFLRGLSFLMLIVNMLCCSSAPKA
LILIVGMVFIACIYLPYKLKKIID

Nucleotide


Download         Length: 1035 bp        

>NTDB_id=457095 C9Q_RS07630 WP_010922583.1 1458820..1459854(-) (pptB) [Streptococcus pyogenes MGAS10870]
ATGAAAGCATTATTTCTGAAACGCCGTCAAGACTTTCAAAAACAACAAAACAAATACCTTCGTTACGTCTTAAATGATCA
CTTTGTTTTGGTGTTGATGTTTTTATTAGGCTTTGCTATGGTGCAGTATGGTCAGCTACTAAACCATTTTCCAACGAATC
ATCTACCTATTCAGGTTTGTCTTGGGATATTGATCCCATTATTGCTCAGTATGGGATCTATAGCAACGTATCTAGAAGAG
GCAGATCAGCATTTCTTACTTCCAAAAGAAGAAGAAGTGATTTCTTATATCAAACAAGCTGAGCGACTCTCTTTTTTGCT
TTGGGGAACTTTGCAGACTGCTGTATTGCTCTTTTTATATCCTATTTTTAGACGTTTAGGTCTGTCTTTATTTATTTTTA
TTATCTTAGTTTTGATATTATTGGCACTAAAAAGAGTAGTGCTTAGTCGAAAGACAAGATATTTTTTGAGAGGAAATCGT
TTAGATTGGGCAAAAGCTGTCGCATTTGAAAGCAATCGCAAGCAAAGTATTTTAAAGTTTTATTCTCTTTTTACAACAGT
CAAAGGAATTTCTACAAAAGTGAAAGAAAGAACTTATCTAAATCCTCTTTTAAAATTAGTTAAGCAAACTCCTTCAAACC
TTTGGCTGTCCCTTTATGCTAGAGCCTTTTTACGTAGTTCAGATTATTTGGGCTTATTTTTACGACTAATGCTATTAAGC
TCATTATCTGTATTTTTTATCCATAATCTTTATTTGTCAGTAAGTTTAGCACTCATTTTTAACTATTTAGTTGTATTCCA
ATTACTTTCACTTTATTATCACTACGATTACCATTATATGACTAGTCTTTATCCTGAAAATAGTCGGAGCAAGAAGAAAA
ATATGTTAAGTTTTTTACGAGGTTTAAGCTTTTTAATGTTAATCGTCAATATGCTGTGTTGCTCATCAGCGCCAAAAGCA
CTCATTTTGATTGTAGGTATGGTTTTCATAGCTTGTATATATCTACCTTATAAGTTAAAGAAGATCATTGACTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0H2UWB0

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus thermophilus LMD-9

43.023

100

0.43

  pptB Streptococcus salivarius strain HSISS4

42.733

100

0.427