Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrR   Type   Regulator
Locus tag   IGS65_RS03590 Genome accession   NZ_CP066294
Coordinates   718232..718666 (-) Length   144 a.a.
NCBI ID   WP_002263292.1    Uniprot ID   Q8DUK6
Organism   Streptococcus mutans strain 27-3     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 713232..723666
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IGS65_RS03570 (IGS65_003570) - 713369..713863 (-) 495 WP_192072197.1 hypothetical protein -
  IGS65_RS03575 (IGS65_003575) tpx 714000..714485 (-) 486 WP_192072196.1 thiol peroxidase -
  IGS65_RS03580 (IGS65_003580) rcrQ 714682..716436 (-) 1755 WP_002263294.1 ABC transporter ATP-binding protein Regulator
  IGS65_RS03585 (IGS65_003585) rcrP 716426..718228 (-) 1803 WP_002266459.1 ABC transporter ATP-binding protein Regulator
  IGS65_RS03590 (IGS65_003590) rcrR 718232..718666 (-) 435 WP_002263292.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  IGS65_RS03595 (IGS65_003595) queC 719108..719761 (+) 654 WP_192072195.1 7-cyano-7-deazaguanine synthase QueC -
  IGS65_RS03600 (IGS65_003600) queD 719761..720207 (+) 447 WP_002265145.1 6-carboxytetrahydropterin synthase QueD -
  IGS65_RS03605 (IGS65_003605) queE 720204..720920 (+) 717 WP_002263289.1 7-carboxy-7-deazaguanine synthase QueE -
  IGS65_RS03610 (IGS65_003610) queF 720933..721421 (+) 489 WP_002263288.1 preQ(1) synthase -
  IGS65_RS03615 (IGS65_003615) - 721531..721914 (+) 384 WP_002270896.1 DUF3021 family protein -
  IGS65_RS03620 (IGS65_003620) gdhA 722024..723373 (-) 1350 WP_002288953.1 NADP-specific glutamate dehydrogenase -

Sequence

Protein


Download         Length: 144 a.a.        Molecular weight: 16720.58 Da        Isoelectric Point: 10.5126

>NTDB_id=454571 IGS65_RS03590 WP_002263292.1 718232..718666(-) (rcrR) [Streptococcus mutans strain 27-3]
MKEPFSEFKNLITATERYIQELSKSHGVEHLSGPQGWTVMFLKDNQGKEIFIKDIEKRLDISKSVTSNLIKRMEKNGFIS
VIPSRKDRRYKQIVLTPLGQEKAGKITVFLTDLKKLLLKDISQEDLSVARKVFKQIKQNLEKKE

Nucleotide


Download         Length: 435 bp        

>NTDB_id=454571 IGS65_RS03590 WP_002263292.1 718232..718666(-) (rcrR) [Streptococcus mutans strain 27-3]
ATGAAGGAGCCTTTTAGTGAATTTAAAAACCTCATTACAGCAACAGAAAGATATATTCAAGAATTATCCAAAAGCCATGG
TGTTGAACATCTGTCCGGACCTCAGGGATGGACAGTTATGTTTTTAAAGGATAATCAAGGAAAGGAAATTTTTATTAAAG
ATATTGAAAAAAGGTTAGATATCTCAAAATCTGTGACCAGTAATCTCATTAAACGAATGGAAAAAAATGGTTTTATTTCT
GTTATTCCTTCCAGAAAAGACAGACGATACAAGCAAATTGTTTTAACGCCATTAGGTCAGGAAAAAGCTGGAAAAATAAC
TGTTTTTTTAACAGATCTTAAAAAGTTGCTTCTAAAAGATATTAGTCAGGAAGACTTATCAGTTGCTCGAAAGGTTTTTA
AACAAATCAAACAAAATTTAGAAAAGAAGGAGTAA

Domains

Predicted by InterProScan.

MarR family (MarR_2)

(31-89)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q8DUK6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrR Streptococcus mutans UA159

100

100

1