Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   IGS65_RS03580 Genome accession   NZ_CP066294
Coordinates   714682..716436 (-) Length   584 a.a.
NCBI ID   WP_002263294.1    Uniprot ID   Q8DUK4
Organism   Streptococcus mutans strain 27-3     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 709682..721436
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IGS65_RS03550 (IGS65_003550) - 710174..710526 (+) 353 Protein_701 DUF1304 family protein -
  IGS65_RS03555 (IGS65_003555) - 710583..711815 (-) 1233 WP_002280909.1 HAMP domain-containing sensor histidine kinase -
  IGS65_RS03560 (IGS65_003560) - 711821..712507 (-) 687 WP_002263646.1 response regulator transcription factor -
  IGS65_RS03565 (IGS65_003565) - 712508..713131 (-) 624 WP_002268771.1 GTP pyrophosphokinase -
  IGS65_RS03570 (IGS65_003570) - 713369..713863 (-) 495 WP_192072197.1 hypothetical protein -
  IGS65_RS03575 (IGS65_003575) tpx 714000..714485 (-) 486 WP_192072196.1 thiol peroxidase -
  IGS65_RS03580 (IGS65_003580) rcrQ 714682..716436 (-) 1755 WP_002263294.1 ABC transporter ATP-binding protein Regulator
  IGS65_RS03585 (IGS65_003585) rcrP 716426..718228 (-) 1803 WP_002266459.1 ABC transporter ATP-binding protein Regulator
  IGS65_RS03590 (IGS65_003590) rcrR 718232..718666 (-) 435 WP_002263292.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  IGS65_RS03595 (IGS65_003595) queC 719108..719761 (+) 654 WP_192072195.1 7-cyano-7-deazaguanine synthase QueC -
  IGS65_RS03600 (IGS65_003600) queD 719761..720207 (+) 447 WP_002265145.1 6-carboxytetrahydropterin synthase QueD -
  IGS65_RS03605 (IGS65_003605) queE 720204..720920 (+) 717 WP_002263289.1 7-carboxy-7-deazaguanine synthase QueE -
  IGS65_RS03610 (IGS65_003610) queF 720933..721421 (+) 489 WP_002263288.1 preQ(1) synthase -

Sequence

Protein


Download         Length: 584 a.a.        Molecular weight: 64590.66 Da        Isoelectric Point: 6.0636

>NTDB_id=454569 IGS65_RS03580 WP_002263294.1 714682..716436(-) (rcrQ) [Streptococcus mutans strain 27-3]
MENKKKSLLSQMAPYLKGYKALFGLAVIFTIVSSTITVIGPDRLKEMTDTMTKGLAGKIDLDKIGEIALTLALLYFAGAL
VSYTASFIVSTLIQKFSQRLRNAIADKINKVPLKYFDSHSQGDTLSRVTNDVDLMTQSFNQSLVSMVAAIILLIGSIFMM
IKTNGALAATAILSVFAGFVLSTVIMAKSQPLFKKQQANLADVSGYVEEVYSGHNVVSSYNAIQQSKKQFENLNDQLFAS
MWKSQFFSGIMMPLMQFIGNFGYVMVCIVGATMAINGDITMGTIVAFMTYVRIFTQPIAQIAQGITQLQSANAAMGRVFE
FLDEEEIEDENHKVKQLEKVEGNVNFDNVFFGYSPDKTIIHDFSAHAKAGQKIAIVGPTGAGKTTIVNLLMRFYEVDRGM
ISIDGVNIHDMTRKEVHDAFAMVLQDTWLFEGTVKENLIYNQKHITDEQVIAAAKAVGVHHFIKTLPKGYDTVLDDSVTL
SVGQKQLLTIARALLKDAPLLILDEATSSVDTRTEELIQRAMDHLMEGRTSFVIAHRLSTIRNADLILVMRDGNIIEQGS
HDQLMAENGFYADLYNSQFTEEVA

Nucleotide


Download         Length: 1755 bp        

>NTDB_id=454569 IGS65_RS03580 WP_002263294.1 714682..716436(-) (rcrQ) [Streptococcus mutans strain 27-3]
ATGGAAAATAAGAAGAAATCATTATTAAGCCAAATGGCTCCTTACCTTAAAGGCTATAAGGCTTTATTTGGACTTGCTGT
CATTTTTACTATCGTTTCAAGTACGATTACTGTTATTGGACCTGACCGGCTGAAAGAGATGACAGATACCATGACCAAAG
GGCTGGCAGGAAAAATTGATTTAGATAAAATCGGTGAGATTGCTCTAACCTTGGCTCTCTTATACTTTGCTGGTGCTTTG
GTTTCTTATACTGCTAGCTTTATTGTGTCCACTTTGATTCAAAAGTTTTCGCAACGTCTGCGCAATGCCATTGCAGATAA
AATCAATAAGGTACCGCTCAAATATTTTGACAGCCATTCACAAGGAGATACCTTGTCTCGAGTGACCAATGATGTGGATT
TAATGACACAGTCTTTCAACCAAAGTTTAGTTTCAATGGTAGCAGCTATAATTCTCCTGATTGGCTCTATTTTCATGATG
ATTAAAACCAATGGAGCTCTTGCAGCGACCGCTATTTTGTCTGTTTTTGCTGGTTTTGTGTTATCCACTGTTATCATGGC
CAAGAGCCAGCCGCTTTTTAAAAAGCAACAAGCTAATCTAGCCGATGTCAGCGGTTATGTTGAAGAGGTCTATTCAGGTC
ATAATGTGGTTTCTAGTTACAATGCGATTCAGCAAAGCAAGAAGCAGTTTGAAAACTTGAATGACCAATTATTTGCAAGT
ATGTGGAAATCACAATTCTTTTCTGGAATTATGATGCCCCTTATGCAATTCATCGGAAATTTTGGGTATGTCATGGTCTG
TATTGTCGGTGCTACCATGGCTATTAACGGCGATATTACTATGGGAACGATTGTTGCCTTTATGACTTACGTCCGTATTT
TTACTCAGCCCATTGCGCAGATTGCTCAAGGAATCACTCAATTGCAATCAGCTAATGCTGCTATGGGACGTGTCTTTGAA
TTTCTTGATGAGGAAGAAATAGAAGACGAAAACCATAAAGTTAAACAACTTGAAAAAGTTGAAGGAAATGTTAATTTTGA
CAATGTTTTCTTTGGTTATAGTCCTGATAAAACTATTATTCATGATTTCTCGGCTCATGCTAAGGCTGGTCAAAAAATTG
CTATTGTGGGACCGACTGGTGCGGGTAAGACAACGATTGTTAACTTACTTATGCGTTTCTATGAGGTTGATAGAGGGATG
ATTTCTATTGATGGAGTTAATATCCATGATATGACACGAAAAGAAGTGCATGATGCTTTTGCCATGGTACTCCAAGATAC
TTGGCTCTTTGAAGGTACAGTTAAGGAAAATCTGATTTATAATCAAAAACATATCACTGATGAGCAAGTGATTGCAGCAG
CTAAGGCAGTTGGTGTTCATCATTTCATCAAGACTTTACCTAAGGGTTATGATACTGTTTTAGATGATTCGGTCACCTTA
TCAGTCGGTCAAAAACAACTCTTGACCATTGCACGTGCTCTTCTTAAAGATGCACCGCTTCTGATTCTTGATGAAGCAAC
TTCCTCTGTTGATACTCGTACGGAAGAACTTATTCAAAGGGCTATGGATCATTTGATGGAGGGGCGGACATCATTCGTTA
TTGCCCATCGTCTGTCAACTATTCGCAATGCTGATCTTATTCTTGTCATGAGAGATGGTAATATTATTGAACAAGGCAGC
CATGACCAATTGATGGCAGAAAATGGCTTCTATGCCGATCTCTATAATAGTCAATTTACAGAAGAAGTGGCTTGA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(361-508)

ABC transporter transmembrane region (ABC_membrane)

(24-297)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q8DUK4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

100

100

1