Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   I33_RS15165 Genome accession   NC_017195
Coordinates   3044365..3046662 (-) Length   765 a.a.
NCBI ID   WP_041519489.1    Uniprot ID   -
Organism   Bacillus subtilis subsp. subtilis str. RO-NN-1     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 3039365..3051662
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I33_RS15125 (I33_3253) mrpB 3039832..3040263 (+) 432 WP_003228819.1 Na(+)/H(+) antiporter subunit B -
  I33_RS15130 (I33_3254) mrpC 3040263..3040604 (+) 342 WP_003220730.1 Na(+)/H(+) antiporter subunit C -
  I33_RS15135 (I33_3255) mrpD 3040597..3042078 (+) 1482 WP_041519487.1 Na+/H+ antiporter subunit D -
  I33_RS15140 (I33_3256) mrpE 3042084..3042560 (+) 477 WP_003228815.1 Na+/H+ antiporter subunit E -
  I33_RS15145 (I33_3257) mrpF 3042560..3042844 (+) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  I33_RS15150 (I33_3258) mnhG 3042828..3043202 (+) 375 WP_014477830.1 monovalent cation/H(+) antiporter subunit G -
  I33_RS15155 (I33_3259) yuxO 3043241..3043621 (-) 381 WP_014477831.1 hotdog fold thioesterase -
  I33_RS15160 (I33_3260) comA 3043640..3044284 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  I33_RS15165 (I33_3261) comP 3044365..3046662 (-) 2298 WP_041519489.1 histidine kinase Regulator
  I33_RS15170 (I33_3262) comX 3046670..3046831 (-) 162 WP_003241045.1 competence pheromone ComX -
  I33_RS15175 (I33_3263) - 3046846..3047706 (-) 861 WP_014477833.1 polyprenyl synthetase family protein -
  I33_RS15180 (I33_3264) degQ 3047891..3048031 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  I33_RS21070 - 3048253..3048378 (+) 126 WP_154796978.1 hypothetical protein -
  I33_RS15185 (I33_3265) - 3048492..3048860 (+) 369 WP_014477834.1 hypothetical protein -
  I33_RS15190 (I33_3266) pdeH 3048836..3050065 (-) 1230 WP_014477835.1 cyclic di-GMP phosphodiesterase -

Sequence


Protein


Download         Length: 765 a.a.        Molecular weight: 88406.83 Da        Isoelectric Point: 8.0515

>NTDB_id=45436 I33_RS15165 WP_041519489.1 3044365..3046662(-) (comP) [Bacillus subtilis subsp. subtilis str. RO-NN-1]
MKSRTNKISVLLVVISLLYVIYLTYISNNNLLVGATVSKGKNGDVVITNVDEYSMASYSGIEKGDIVKRINNQKINTKEI
KMNKLKNVSSMVVERNGKDVELKLTLFNDKNFSTYLIPLMFYIVCLFCCLFIIKINESKDLPSALVLIIFLLSASIAYIS
AGVSVKGDILCRCIMVVTLISVPLNYLLFLYHYFRELGTTLFDKKVFILYLVPIINVVCEMFRSHLFFRDYVPKLSLLSF
FFLFIIVGIYFCIILIKNKDTEQAHIIKVLTIINIFSFSPFLCLYLIPYVFLNAHYVSSFLAASFMMLIPFSLVFQFMTN
KIYNVDFILSRLRYYGFLALTPTIILISTIELISSPDSDFYSVKLTFLIYIIMLAVFYYKEVLDFRFRLKRVSEKFNYQD
SIYKFTQMIRDSTSLSQVFEELKNTILEVSLVSRAHVYEVSADGSIKLYDNEAVNSFEKVYQKEFRKVTSEIGKIVEFNK
GFVMKIGERGGKSFVILCLSKMNTPRLTLEELSWLKTLAFYTNVSIENVMKIEELMSHLEEIKQQESNPVWLKKLMYTIE
EKQRSDLARDLHDSVLQDLISLKRQCELFLGDFKKDDNPCREEVQDKLVQMNEQMSDVISMTRETCHELRPQLLYDLGLV
KALSKLVAQQQERVPFHIRLNTGRFTASLDLDSQLNLYRIIQEFLSNAVKHSQATDVLIMLISIQNKIVLHYEDDGVGFD
QEKNTEHSMSMGLSGIKERVRALDGRLRIETSEGKGFKADIEIEL

Nucleotide


Download         Length: 2298 bp        

>NTDB_id=45436 I33_RS15165 WP_041519489.1 3044365..3046662(-) (comP) [Bacillus subtilis subsp. subtilis str. RO-NN-1]
ATGAAGTCTAGAACCAATAAAATTTCTGTATTGTTAGTTGTAATAAGTCTGTTATATGTTATTTATTTGACTTATATAAG
CAATAATAATTTGTTAGTTGGAGCAACTGTTTCGAAAGGGAAGAACGGAGACGTTGTAATTACCAATGTAGATGAATATT
CAATGGCATCATACAGCGGAATAGAAAAAGGGGATATCGTAAAGCGTATTAATAATCAAAAGATAAACACTAAAGAAATA
AAAATGAATAAGCTTAAAAATGTGAGCTCAATGGTTGTTGAGAGAAATGGCAAGGATGTTGAGCTAAAGCTGACTTTATT
TAATGATAAAAATTTTTCTACTTACTTAATACCGTTAATGTTTTATATTGTTTGTTTATTTTGTTGCCTATTTATAATAA
AAATAAATGAATCAAAGGATTTACCATCTGCTTTAGTTTTAATTATATTTCTGTTATCGGCTTCTATTGCTTATATAAGC
GCAGGAGTTTCTGTTAAAGGCGATATACTATGCAGATGTATTATGGTGGTAACATTAATATCTGTACCGCTAAACTACCT
TCTCTTTCTTTATCATTATTTTAGAGAGTTAGGCACTACCTTATTTGATAAAAAAGTTTTCATTTTATATTTGGTACCGA
TCATAAATGTAGTGTGTGAAATGTTCCGTTCACATCTTTTCTTTCGTGATTATGTGCCTAAATTAAGTTTACTATCCTTT
TTCTTTTTATTTATCATAGTAGGGATATATTTCTGTATCATTTTAATTAAAAATAAAGATACTGAACAAGCACATATTAT
TAAGGTTCTCACTATTATTAATATCTTTTCTTTCTCACCTTTTTTGTGTTTATATTTGATACCTTATGTCTTTTTAAATG
CGCACTATGTTTCATCCTTTTTAGCAGCTTCATTTATGATGCTAATACCTTTCTCCTTAGTATTTCAATTCATGACAAAT
AAAATCTATAATGTAGATTTTATTTTAAGCAGATTAAGGTATTATGGCTTTTTAGCTCTAACGCCAACAATTATTCTAAT
CTCTACAATTGAATTAATTAGTAGTCCTGATAGTGATTTTTATAGTGTTAAACTAACCTTTTTAATTTATATTATCATGT
TGGCGGTCTTTTATTATAAAGAAGTACTTGATTTCAGATTTAGATTAAAAAGGGTCTCGGAAAAATTCAATTATCAAGAC
AGTATATATAAATTCACGCAGATGATAAGAGACTCTACTTCTCTGTCTCAAGTATTTGAAGAACTGAAAAATACTATACT
TGAGGTCTCTCTTGTTAGCCGAGCACATGTATATGAAGTGTCAGCTGACGGAAGTATTAAACTATATGATAATGAGGCCG
TAAATTCATTTGAAAAAGTCTATCAAAAAGAATTTAGAAAAGTCACATCCGAAATAGGGAAAATCGTTGAATTTAATAAA
GGCTTTGTCATGAAGATAGGTGAACGTGGTGGAAAATCATTTGTGATTCTTTGTTTATCTAAAATGAATACGCCCCGTCT
CACACTTGAAGAACTTTCTTGGCTGAAAACTTTGGCTTTTTATACAAACGTATCGATCGAAAACGTCATGAAAATCGAAG
AACTGATGAGTCATTTAGAAGAAATAAAACAACAAGAATCCAACCCCGTATGGCTCAAAAAACTCATGTATACGATCGAG
GAAAAACAACGCTCGGATCTCGCCCGCGATCTCCACGATTCGGTTCTTCAGGATTTGATTTCCTTAAAACGCCAGTGTGA
GCTGTTTTTGGGTGATTTTAAGAAGGATGATAATCCGTGCCGTGAAGAGGTGCAGGACAAGCTTGTGCAGATGAATGAGC
AGATGTCTGATGTGATTTCGATGACGAGGGAGACGTGTCATGAGCTGCGGCCGCAGCTTCTGTATGATCTTGGATTGGTG
AAGGCTCTGTCGAAGCTGGTGGCGCAGCAGCAGGAGCGGGTTCCGTTTCATATCCGTTTAAATACCGGGAGATTTACGGC
TTCCCTTGATCTGGATTCGCAGCTGAATTTATACCGGATCATTCAAGAATTCCTGTCTAATGCGGTTAAACACTCTCAAG
CCACAGATGTACTGATTATGCTCATTAGTATACAAAACAAAATCGTTCTTCATTATGAGGATGATGGCGTAGGGTTTGAC
CAGGAAAAAAATACTGAGCATTCCATGAGCATGGGGCTTTCTGGCATTAAGGAGAGAGTCAGGGCTTTAGATGGGCGCCT
TCGGATTGAAACAAGTGAAGGAAAGGGCTTTAAGGCTGATATTGAAATCGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

59.326

100

0.599


Multiple sequence alignment