Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   I33_RS06030 Genome accession   NC_017195
Coordinates   1202149..1202805 (+) Length   218 a.a.
NCBI ID   WP_014476436.1    Uniprot ID   -
Organism   Bacillus subtilis subsp. subtilis str. RO-NN-1     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1197149..1207805
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I33_RS06005 (I33_1279) oppF 1197615..1198532 (+) 918 WP_003245567.1 oligopeptide ABC transporter ATP-binding protein OppF -
  I33_RS06010 (I33_1280) yjbB 1198640..1199857 (+) 1218 WP_080009875.1 MFS transporter -
  I33_RS06015 (I33_1281) yjbC 1200021..1200599 (+) 579 WP_003224597.1 GNAT family N-acetyltransferase -
  I33_RS06020 (I33_1282) spx 1200780..1201175 (+) 396 WP_014476435.1 transcriptional regulator Spx -
  I33_RS06025 (I33_1283) yjbE 1201216..1201872 (-) 657 WP_003232944.1 TerC family protein -
  I33_RS20900 - 1202042..1202182 (+) 141 WP_119122854.1 hypothetical protein -
  I33_RS06030 (I33_1284) mecA 1202149..1202805 (+) 657 WP_014476436.1 adaptor protein MecA Regulator
  I33_RS20905 (I33_1285) - 1202800..1202922 (-) 123 WP_003245684.1 hypothetical protein -
  I33_RS06035 (I33_1286) coiA 1202966..1204117 (+) 1152 WP_014476437.1 competence protein CoiA Machinery gene
  I33_RS06040 (I33_1287) pepF 1204347..1206176 (+) 1830 WP_187955983.1 oligoendopeptidase F -
  I33_RS20175 (I33_1288) - 1206214..1206381 (-) 168 WP_003244944.1 hypothetical protein -
  I33_RS06050 (I33_1289) spxH 1206696..1207595 (-) 900 WP_014476439.1 protease adaptor protein SpxH -

Sequence

Protein


Download         Length: 218 a.a.        Molecular weight: 25775.65 Da        Isoelectric Point: 4.0509

>NTDB_id=45398 I33_RS06030 WP_014476436.1 1202149..1202805(+) (mecA) [Bacillus subtilis subsp. subtilis str. RO-NN-1]
MEIERINEHTVKFYMSYGDIEDRGFDREEIWYNRERSEELFWEVMDEVHEEEEFAVEGPLWIQVQALDKGLEIIVTKAQL
SKDGQKLELPIPEDKKQEPASEDLDALLDDFQKEEQAVNQEEKEQKLQFVLRFGDFEDVISLSNLNVNGSKTTLYSFENR
YYLYVDFCNMTDEEVENQLSILLEYATESSISIHRLEEYGKLIISEYALETIKKHFAS

Nucleotide


Download         Length: 657 bp        

>NTDB_id=45398 I33_RS06030 WP_014476436.1 1202149..1202805(+) (mecA) [Bacillus subtilis subsp. subtilis str. RO-NN-1]
ATGGAAATTGAAAGAATTAACGAGCATACAGTAAAATTTTATATGTCTTACGGAGATATTGAAGATCGCGGTTTTGACAG
AGAAGAAATTTGGTATAACCGTGAGCGCAGTGAAGAACTTTTCTGGGAAGTCATGGATGAAGTTCATGAAGAAGAGGAAT
TCGCTGTGGAAGGCCCACTTTGGATTCAAGTTCAGGCACTGGACAAAGGATTAGAAATCATCGTCACAAAAGCCCAGCTT
TCCAAAGACGGACAAAAGCTCGAACTGCCGATTCCTGAGGATAAAAAGCAAGAACCAGCATCTGAGGATCTTGACGCCTT
GCTGGATGATTTCCAGAAAGAAGAGCAAGCCGTCAATCAGGAAGAGAAGGAGCAAAAGCTTCAATTTGTCTTGCGATTTG
GCGATTTTGAGGATGTTATTTCTCTATCTAATTTGAACGTTAACGGAAGCAAAACGACTTTATATTCGTTTGAGAACCGA
TATTATTTATATGTAGATTTTTGCAATATGACTGATGAAGAGGTTGAAAATCAGCTAAGCATCCTGCTGGAGTACGCAAC
TGAATCTTCAATCAGCATACACCGTCTTGAAGAGTACGGCAAGCTGATTATTTCAGAGTATGCTCTAGAAACGATAAAAA
AACACTTTGCATCATAG

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-212)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

99.083

100

0.991

Multiple sequence alignment