Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   HT135_RS02150 Genome accession   NZ_CP054584
Coordinates   431515..432465 (+) Length   316 a.a.
NCBI ID   WP_106021021.1    Uniprot ID   -
Organism   Bacillus halotolerans strain KKD1     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 426515..437465
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HT135_RS02125 (HT135_02125) rapC 427904..429052 (+) 1149 WP_024120212.1 response regulator aspartate phosphatase RapC Regulator
  HT135_RS02130 (HT135_02130) phrC 429036..429158 (+) 123 WP_024120213.1 PhrC/PhrF family phosphatase-inhibitory pheromone Regulator
  HT135_RS02135 (HT135_02135) - 429263..429355 (-) 93 WP_024120214.1 YjcZ family sporulation protein -
  HT135_RS02140 (HT135_02140) - 429502..429612 (-) 111 WP_106021023.1 YjcZ family sporulation protein -
  HT135_RS02145 (HT135_02145) - 429765..431129 (-) 1365 WP_095714086.1 aspartate kinase -
  HT135_RS02150 (HT135_02150) ceuB 431515..432465 (+) 951 WP_106021021.1 petrobactin ABC transporter permease YclN Machinery gene
  HT135_RS02155 (HT135_02155) yclO 432458..433405 (+) 948 WP_024120217.1 petrobactin ABC transporter permease YclO -
  HT135_RS02160 (HT135_02160) yclP 433399..434157 (+) 759 WP_106021019.1 petrobactin ABC transporter ATP-binding protein YclP -
  HT135_RS02165 (HT135_02165) - 434179..435132 (+) 954 WP_106021018.1 siderophore ABC transporter substrate-binding protein -
  HT135_RS02170 (HT135_02170) - 435181..436599 (-) 1419 WP_095714088.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34997.42 Da        Isoelectric Point: 9.8262

>NTDB_id=453686 HT135_RS02150 WP_106021021.1 431515..432465(+) (ceuB) [Bacillus halotolerans strain KKD1]
MKLRYLFFLLIILAVTSVFIGVEDLSPLDLFDLSKEEASTLFASRLPRLISILIAGMSMSICGLIMQQITRNKFVSPTTA
GTMDWARLGILISLLLFSSASPLMKMLIAFVFALVGNFLFMKILERIKFNDTIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNVSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTVAGMGESFSVNLGLKYKRVVNIGLIIVSLITSLVILTVGM
LPFLGLIIPNIVSIYRGDNLKNSLPHTALLGAVFVLFCDILGRVIIFPYEISIGLMVGIIGSGIFLFMLLRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=453686 HT135_RS02150 WP_106021021.1 431515..432465(+) (ceuB) [Bacillus halotolerans strain KKD1]
ATGAAGCTACGTTACTTATTTTTTCTACTTATCATATTAGCAGTCACTTCTGTATTTATCGGCGTAGAAGATCTGTCGCC
GCTTGATCTCTTTGATTTAAGCAAAGAAGAGGCGTCAACGCTCTTTGCCAGCCGTTTGCCGCGGCTGATCAGCATTCTAA
TCGCGGGCATGAGCATGAGCATCTGCGGACTGATTATGCAGCAGATCACCAGAAACAAATTCGTGTCACCGACAACGGCC
GGCACGATGGACTGGGCGAGGCTGGGAATCTTAATATCCTTGCTTCTGTTTTCATCGGCAAGTCCTTTAATGAAAATGCT
GATTGCTTTTGTCTTTGCTTTAGTCGGCAATTTTCTGTTTATGAAAATTCTTGAAAGAATCAAGTTTAACGACACCATCT
TTATTCCGCTAGTCGGTTTAATGCTCGGGAATATCGTCAGCTCAATCGCGACGTTTATCGCGTATAAATATGACCTGATC
CAGAACGTGTCATCATGGCTTCAGGGGGATTTCTCCTTAGTTGTGAAAGGGAGATACGAGCTTCTCTATCTGAGTATTCC
GCTTGTCATCATTGCCTATGTTTATGCGGATAAATTTACAGTGGCGGGTATGGGAGAAAGCTTTTCTGTCAACCTCGGCC
TCAAGTATAAACGGGTTGTGAACATCGGGCTCATTATCGTATCCCTGATTACATCACTTGTCATTTTGACTGTCGGTATG
CTTCCGTTTCTCGGTTTAATCATCCCGAACATTGTATCAATTTACAGAGGAGACAACCTGAAAAACAGCCTGCCGCACAC
TGCGCTGCTGGGAGCGGTTTTTGTTCTGTTTTGCGATATATTGGGCAGAGTCATTATCTTCCCATATGAAATCTCGATTG
GTCTGATGGTCGGAATCATCGGCAGCGGCATTTTCCTGTTTATGCTGTTAAGGAGAAAAGCGTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

53.797

100

0.538