Detailed information NTG0453684

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: HT135_RS02125
• Genome accession: NZ_CP054584
• Coordinates: 427904..429052 (+)
• Length: 382 a.a.
• NCBI ID: WP_024120212.1
• Uniprot ID: A0A7G7UCE4
• Organism: Bacillus halotolerans strain KKD1
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 422904..434052

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HT135_RS02105 (HT135_02105)	-	423278..423958 (-)	681	WP_106021026.1	ABC transporter ATP-binding protein	-
HT135_RS02110 (HT135_02110)	-	423974..425428 (-)	1455	WP_106021025.1	ABC transporter permease	-
HT135_RS02115 (HT135_02115)	-	425641..426324 (+)	684	WP_106021120.1	response regulator transcription factor	-
HT135_RS02120 (HT135_02120)	-	426311..427735 (+)	1425	WP_101860980.1	sensor histidine kinase	-
HT135_RS02125 (HT135_02125)	rapC	427904..429052 (+)	1149	WP_024120212.1	response regulator aspartate phosphatase RapC	Regulator
HT135_RS02130 (HT135_02130)	phrC	429036..429158 (+)	123	WP_024120213.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
HT135_RS02135 (HT135_02135)	-	429263..429355 (-)	93	WP_024120214.1	YjcZ family sporulation protein	-
HT135_RS02140 (HT135_02140)	-	429502..429612 (-)	111	WP_106021023.1	YjcZ family sporulation protein	-
HT135_RS02145 (HT135_02145)	-	429765..431129 (-)	1365	WP_095714086.1	aspartate kinase	-
HT135_RS02150 (HT135_02150)	ceuB	431515..432465 (+)	951	WP_106021021.1	petrobactin ABC transporter permease YclN	Machinery gene
HT135_RS02155 (HT135_02155)	yclO	432458..433405 (+)	948	WP_024120217.1	petrobactin ABC transporter permease YclO	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45690.75 Da
• Isoelectric Point: 5.2483

>NTDB_id=453684 HT135_RS02125 WP_024120212.1 427904..429052(+) (rapC) [Bacillus halotolerans strain KKD1]
MKSGVIPSSAVGQKINEWYKYIRTFSVPDAEVLKAEIQQELKHMQHDSNLLLYYSLMEFRHQLMLDYLEPLEKLNIEDQP
SLSELSRNIDSNQADLKGLLDYYVNFFRGMYEFDKREFISAITYYKQAEKKLSFVSDHIERAEFYFKIAEAYYYMKQTYF
SLIHIKNAYEIYVEQETYNVRIIQCHFVFGVNLMDERNFEQAARHFKLALEMAEAEQKAQLVGRAFYNLGLCYYNQDLLD
PAIEHFEKAVSTFENSRITNSLPQAYFLITLIYYKRGKHEKASEYHKRGYEYAKETDDADYAVKFEFLQSLYQAQPNTEG
IERCFRYLKNKNMYADIEDLGLEVAKYYYEQKWFELSASYFLRVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=453684 HT135_RS02125 WP_024120212.1 427904..429052(+) (rapC) [Bacillus halotolerans strain KKD1]
ATGAAGAGCGGGGTAATTCCTTCTTCAGCGGTCGGTCAAAAAATTAACGAGTGGTACAAATATATCCGGACCTTCAGCGT
GCCGGATGCCGAGGTGCTAAAAGCTGAAATCCAGCAGGAACTGAAACACATGCAGCATGATTCCAACTTGCTGTTATATT
ACTCACTAATGGAATTTCGCCACCAGCTTATGCTTGATTATCTCGAGCCGCTGGAGAAATTAAATATCGAAGACCAGCCA
AGCCTGTCTGAATTATCACGAAATATAGACAGCAACCAAGCTGATCTGAAAGGGCTTCTCGATTATTATGTGAATTTTTT
CCGCGGAATGTATGAGTTTGATAAGCGGGAATTTATTTCTGCCATTACATATTACAAACAGGCGGAGAAAAAACTTTCTT
TTGTTTCCGATCATATTGAACGGGCTGAATTTTATTTTAAAATCGCGGAAGCTTATTATTATATGAAGCAAACGTACTTT
TCATTGATTCATATCAAAAATGCATATGAAATTTATGTAGAGCAGGAAACCTATAATGTTCGGATTATCCAATGCCATTT
TGTGTTCGGGGTCAACCTCATGGATGAGAGAAATTTTGAACAAGCCGCACGGCATTTCAAATTGGCGCTGGAGATGGCGG
AAGCGGAACAAAAAGCCCAATTGGTCGGAAGAGCATTTTATAATTTAGGGCTGTGTTATTACAATCAAGACCTTCTCGAC
CCTGCCATTGAACATTTTGAGAAAGCGGTTTCCACTTTTGAAAACAGCAGAATCACCAATTCTCTGCCTCAAGCATATTT
TTTAATAACACTTATTTATTATAAACGCGGAAAACATGAGAAGGCCTCGGAATATCACAAGAGGGGCTATGAATATGCTA
AAGAAACAGACGATGCAGATTACGCGGTAAAATTTGAGTTTTTACAATCCCTATATCAGGCACAGCCCAATACAGAAGGA
ATCGAACGATGTTTCCGATATTTAAAAAATAAAAATATGTATGCTGATATAGAGGATTTAGGCCTAGAAGTAGCAAAATA
TTACTATGAACAAAAATGGTTTGAACTGTCTGCTTCCTACTTTCTTAGAGTTGAAGAGGCAAGAAAACAAATACAAAGGA
GTGAAGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-66)

• Tetratricopeptide repeat (TPR_12) (224-294)

3D structure

• AlphaFold DB: A0A7G7UCE4

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	95.026	100	0.95
rapF	Bacillus subtilis subsp. subtilis str. 168	56.316	99.476	0.56