Detailed information    

insolico Bioinformatically predicted

Overview


Name   vicK   Type   Regulator
Locus tag   I6H73_RS02435 Genome accession   NZ_CP066073
Coordinates   470174..471526 (+) Length   450 a.a.
NCBI ID   WP_003057196.1    Uniprot ID   A0ABU0A534
Organism   Streptococcus dysgalactiae strain FDAARGOS_1016     
Function   repress comCDE expression; repress comX expression (predicted from homology)   
Competence regulation

Genomic Context


Location: 465174..476526
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6H73_RS02410 (I6H73_02410) - 466241..466888 (-) 648 WP_003057245.1 amino acid ABC transporter permease -
  I6H73_RS02415 (I6H73_02415) - 466903..467604 (-) 702 WP_003057191.1 amino acid ABC transporter permease -
  I6H73_RS02420 (I6H73_02420) - 467618..468418 (-) 801 WP_003057243.1 transporter substrate-binding domain-containing protein -
  I6H73_RS02425 (I6H73_02425) - 468418..469212 (-) 795 WP_003057217.1 amino acid ABC transporter ATP-binding protein -
  I6H73_RS02430 (I6H73_02430) yycF 469471..470181 (+) 711 WP_003057225.1 response regulator YycF -
  I6H73_RS02435 (I6H73_02435) vicK 470174..471526 (+) 1353 WP_003057196.1 cell wall metabolism sensor histidine kinase VicK Regulator
  I6H73_RS02440 (I6H73_02440) vicX 471530..472339 (+) 810 WP_003057211.1 MBL fold metallo-hydrolase Regulator
  I6H73_RS02445 (I6H73_02445) rnc 473097..473789 (+) 693 WP_003057240.1 ribonuclease III -

Sequence


Protein


Download         Length: 450 a.a.        Molecular weight: 51490.13 Da        Isoelectric Point: 5.9423

>NTDB_id=453636 I6H73_RS02435 WP_003057196.1 470174..471526(+) (vicK) [Streptococcus dysgalactiae strain FDAARGOS_1016]
MTRDIIGNLSAFELAILLLLVFVAFYFIHLAVRDYRNARIIRMMSHKIRDLINGRYTDMINEKADIELMELADQLNDLSD
VFRLTHENLAQEKKRLASILAYMSDGVLATDRSGKIIMINETARKQLNLTKEKALEKNITDLLEGDTPYTYRELVSKTPV
VTVNSRNDMGEFVTLRLRFALNRRESGFISGLVVVLHDTTEQEKEERERRLFVSNVSHELRTPLTSVKSYLEALDEGAIK
EDIAPSFIKVSLDETNRMMRMISDLLNLSRIDNQVTQLSVEMTNFTAFMTSILNRFDLVKNQHTGTGKVYEIVRDYPITS
VWLEIDNDKMTQVIENILNNAIKYSPDGGKITVRMKTTDTQLIISISDQGLGIPKKDLPLIFDRFYRVDKARSRAQGGTG
LGLAIAKEIIKQHHGFIWAKSDYGKGSTFTIVLPYEKDAAIYEEWEDDID

Nucleotide


Download         Length: 1353 bp        

>NTDB_id=453636 I6H73_RS02435 WP_003057196.1 470174..471526(+) (vicK) [Streptococcus dysgalactiae strain FDAARGOS_1016]
ATGACTAGAGATATCATTGGAAACTTATCCGCTTTTGAATTAGCGATTCTCTTATTACTTGTTTTTGTTGCCTTTTATTT
TATTCACTTAGCGGTGCGTGATTACCGAAATGCCCGTATTATTCGAATGATGAGCCATAAAATCAGAGACCTGATTAATG
GCCGTTATACCGACATGATTAACGAAAAGGCTGACATTGAATTGATGGAACTGGCAGATCAGTTAAACGATCTCTCAGAC
GTGTTTCGCTTAACCCATGAGAATCTTGCCCAGGAAAAAAAACGCTTGGCCAGCATTCTGGCCTATATGTCAGATGGCGT
ACTTGCCACAGACCGGTCTGGTAAAATCATCATGATTAACGAGACAGCTCGCAAGCAGCTCAATCTGACCAAGGAGAAGG
CCCTTGAAAAGAACATTACCGATTTGTTGGAGGGAGATACCCCCTATACCTATCGTGAATTGGTTTCCAAAACGCCTGTT
GTGACGGTCAATAGTCGCAATGACATGGGTGAGTTTGTTACATTACGTTTACGCTTCGCCTTAAACAGACGAGAAAGTGG
TTTTATTTCTGGTTTGGTTGTGGTGCTCCATGACACTACAGAACAGGAAAAGGAAGAACGTGAACGCCGGTTGTTTGTTT
CTAATGTGAGTCATGAGTTGAGAACACCTTTGACATCGGTGAAATCCTACTTGGAGGCTCTTGACGAAGGTGCCATCAAG
GAAGATATTGCTCCAAGTTTCATAAAAGTTTCTCTTGATGAAACCAATCGGATGATGCGTATGATTTCCGATCTTTTAAA
CTTGTCTCGCATTGATAACCAAGTAACTCAGTTATCTGTCGAGATGACCAATTTTACAGCTTTTATGACATCTATCCTGA
ACCGATTTGACCTAGTTAAAAACCAGCACACCGGTACTGGCAAGGTTTATGAAATTGTGAGAGACTATCCGATTACCTCT
GTTTGGCTGGAAATTGATAATGATAAGATGACGCAGGTTATTGAAAATATCCTAAACAACGCGATTAAATACTCTCCTGA
TGGTGGGAAAATCACTGTTCGCATGAAAACAACCGACACGCAATTGATTATTTCCATCTCAGACCAAGGCTTAGGCATTC
CGAAGAAGGATCTGCCCCTTATTTTTGACCGTTTTTACCGTGTGGACAAGGCAAGAAGCCGTGCTCAAGGTGGAACTGGT
CTAGGGCTTGCCATTGCCAAAGAAATTATTAAGCAGCATCACGGGTTTATTTGGGCGAAGAGTGATTATGGCAAAGGATC
AACCTTTACCATCGTCTTGCCATATGAAAAAGATGCTGCCATTTACGAAGAGTGGGAGGATGACATAGATTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicK Streptococcus mutans UA159

72.947

92

0.671

  micB Streptococcus pneumoniae Cp1015

66.824

94.444

0.631