Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   I6H73_RS02440 Genome accession   NZ_CP066073
Coordinates   471530..472339 (+) Length   269 a.a.
NCBI ID   WP_003057211.1    Uniprot ID   A0ABU0A532
Organism   Streptococcus dysgalactiae strain FDAARGOS_1016     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 466530..477339
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6H73_RS02415 (I6H73_02415) - 466903..467604 (-) 702 WP_003057191.1 amino acid ABC transporter permease -
  I6H73_RS02420 (I6H73_02420) - 467618..468418 (-) 801 WP_003057243.1 transporter substrate-binding domain-containing protein -
  I6H73_RS02425 (I6H73_02425) - 468418..469212 (-) 795 WP_003057217.1 amino acid ABC transporter ATP-binding protein -
  I6H73_RS02430 (I6H73_02430) yycF 469471..470181 (+) 711 WP_003057225.1 response regulator YycF -
  I6H73_RS02435 (I6H73_02435) vicK 470174..471526 (+) 1353 WP_003057196.1 cell wall metabolism sensor histidine kinase VicK Regulator
  I6H73_RS02440 (I6H73_02440) vicX 471530..472339 (+) 810 WP_003057211.1 MBL fold metallo-hydrolase Regulator
  I6H73_RS02445 (I6H73_02445) rnc 473097..473789 (+) 693 WP_003057240.1 ribonuclease III -
  I6H73_RS02450 (I6H73_02450) smc 473790..477335 (+) 3546 WP_003057203.1 chromosome segregation protein SMC -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30191.40 Da        Isoelectric Point: 6.0739

>NTDB_id=453637 I6H73_RS02440 WP_003057211.1 471530..472339(+) (vicX) [Streptococcus dysgalactiae strain FDAARGOS_1016]
MIESGFKYSILASGSTGNCFYLETPKKRLLIDAGLTGKKITSLLAEIDRKPEDLDAILITHEHSDHIKGVGVMARKYHLD
VYANEKTWQFMDERNMLGKLDASQKHIFQRDKMLTFGDVDIESFGVSHDAVDPQFYRIMKDNKSFVMLTDTGYVSDRMTG
IIENADGYLIESNHDIEILRSGSYPWSLKQRILSDMGHLSNEDGAGAMIRSLGHKTKKIYLGHLSKENNIKELAHMTMVN
QLAMADLAVGTDFTVHDTSPDTACPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=453637 I6H73_RS02440 WP_003057211.1 471530..472339(+) (vicX) [Streptococcus dysgalactiae strain FDAARGOS_1016]
ATGATTGAAAGTGGTTTTAAATACAGTATTTTAGCATCCGGATCCACAGGCAATTGTTTTTATTTAGAAACACCTAAAAA
GCGATTATTAATTGACGCGGGGTTGACTGGTAAGAAAATCACCAGTCTCCTTGCTGAAATTGACCGCAAGCCTGAAGATT
TAGATGCTATTTTGATTACACATGAACATTCAGATCATATCAAGGGAGTGGGAGTGATGGCTCGCAAGTACCATTTGGAT
GTTTATGCCAACGAAAAAACATGGCAGTTTATGGATGAGCGTAATATGCTCGGGAAGCTTGATGCCTCCCAAAAACATAT
TTTCCAAAGAGATAAGATGTTGACCTTTGGAGATGTTGACATTGAAAGTTTTGGCGTTAGTCACGATGCGGTTGATCCTC
AGTTTTACCGCATTATGAAGGACAACAAATCGTTTGTGATGCTGACTGATACAGGTTATGTCAGTGACCGAATGACAGGT
ATTATTGAAAATGCAGATGGCTACTTGATTGAGTCCAATCATGACATTGAAATTTTACGGTCGGGTTCTTACCCTTGGAG
TTTAAAACAACGCATTTTGTCAGACATGGGCCATTTGTCAAATGAAGATGGCGCTGGAGCTATGATTAGAAGTTTAGGGC
ATAAGACCAAAAAAATCTATTTGGGCCATTTGAGTAAAGAAAATAACATCAAAGAGTTGGCTCACATGACCATGGTGAAC
CAATTAGCCATGGCAGATTTAGCGGTAGGTACAGACTTTACTGTTCATGACACTTCCCCAGACACAGCTTGTCCCTTGAC
GGATATTTAA

Domains

Predicted by InterProScan.

Beta-lactamase superfamily domain (Lactamase_B_2)

(28-217)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

76.58

100

0.766