Detailed information    

insolico Bioinformatically predicted

Overview


Name   xerS   Type   Machinery gene
Locus tag   I6H74_RS06725 Genome accession   NZ_CP066069
Coordinates   1372989..1374059 (+) Length   356 a.a.
NCBI ID   WP_115256898.1    Uniprot ID   -
Organism   Streptococcus dysgalactiae strain FDAARGOS_1017     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 1367989..1379059
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6H74_RS06705 (I6H74_06700) - 1368822..1369469 (+) 648 WP_046177271.1 response regulator transcription factor -
  I6H74_RS06710 (I6H74_06705) - 1369453..1370523 (+) 1071 WP_115256900.1 HAMP domain-containing sensor histidine kinase -
  I6H74_RS06715 (I6H74_06710) - 1370648..1371070 (+) 423 WP_003058336.1 cupin domain-containing protein -
  I6H74_RS06720 (I6H74_06715) - 1371101..1372345 (-) 1245 WP_115256899.1 peptidoglycan bridge formation glycyltransferase FemA/FemB family protein -
  I6H74_RS06725 (I6H74_06720) xerS 1372989..1374059 (+) 1071 WP_115256898.1 tyrosine recombinase XerS Machinery gene
  I6H74_RS06730 (I6H74_06725) - 1374136..1374576 (+) 441 WP_046177267.1 NusG domain II-containing protein -
  I6H74_RS06735 (I6H74_06730) - 1374647..1375597 (-) 951 WP_046177266.1 1,4-dihydroxy-2-naphthoate polyprenyltransferase -
  I6H74_RS06740 (I6H74_06735) - 1375587..1376639 (-) 1053 WP_115256897.1 FAD:protein FMN transferase -
  I6H74_RS06745 (I6H74_06740) - 1376710..1377216 (-) 507 WP_046177265.1 FMN-binding protein -
  I6H74_RS06750 (I6H74_06745) - 1377307..1378305 (-) 999 WP_115256896.1 polyprenyl synthetase family protein -

Sequence


Protein


Download         Length: 356 a.a.        Molecular weight: 41416.65 Da        Isoelectric Point: 9.4794

>NTDB_id=453567 I6H74_RS06725 WP_115256898.1 1372989..1374059(+) (xerS) [Streptococcus dysgalactiae strain FDAARGOS_1017]
MRRDLLLEKIETYKAIMPWYVLEYYQSKLAVPYSFTTLYEYLKEYKRFFDWLMDADLTDATVIADIDLATLEHLTKKDLE
AFVLYLRERPSLNTYSTREGLSQTTINRTLSALSSLYKYLTEEVENDQGEPYFYRNVMKKVSTKKKKETLASRAENIKQK
LFLGDETMGFLEYVDKDYELKLSNRAKSSFRKNKERDLAIIALLLASGVRLSEAVNLDLKDVNLNMMVIEVIRKGGKRDS
VNVAGFAKPYLEAYLAIRKNRYMAEKQDLAFFLTEYRGVPNRMDASSIEKMVGKYSQDFKIRVTPHKLRHTLATRLYDAT
KSQVLVSHQLGHASTQVTDLYTHIVNDEQKNALDKL

Nucleotide


Download         Length: 1071 bp        

>NTDB_id=453567 I6H74_RS06725 WP_115256898.1 1372989..1374059(+) (xerS) [Streptococcus dysgalactiae strain FDAARGOS_1017]
ATGAGACGTGATTTATTACTCGAAAAAATAGAAACTTATAAAGCTATCATGCCTTGGTATGTGTTAGAATACTATCAGTC
AAAATTGGCTGTCCCATACAGTTTTACAACGCTATATGAGTATTTAAAAGAATACAAACGTTTTTTTGACTGGTTAATGG
ATGCTGACTTAACGGATGCGACTGTCATTGCTGATATCGATTTAGCGACTCTTGAACACTTGACTAAGAAAGATTTAGAG
GCCTTTGTTCTGTACCTAAGAGAACGCCCTTCTCTTAATACTTATTCCACCAGAGAGGGTCTTTCTCAAACAACGATTAA
TCGCACTTTGTCTGCTTTATCAAGCCTTTATAAATATTTGACTGAAGAGGTTGAAAATGATCAGGGAGAGCCTTATTTCT
ATCGGAATGTCATGAAGAAGGTGTCCACGAAGAAGAAAAAAGAAACCCTAGCTTCTAGAGCTGAAAACATTAAACAAAAG
CTTTTTTTAGGGGATGAAACCATGGGTTTTCTAGAGTATGTAGATAAGGACTATGAACTCAAATTATCCAATCGTGCCAA
ATCTTCTTTCCGTAAAAATAAAGAGAGAGATCTAGCTATTATTGCCCTACTACTGGCCTCAGGCGTTCGTCTATCAGAAG
CCGTTAATCTTGATTTAAAAGATGTTAACCTTAATATGATGGTTATTGAGGTTATCCGCAAAGGGGGAAAACGAGATTCA
GTGAATGTTGCAGGTTTTGCTAAACCTTATTTAGAAGCTTATCTGGCTATTCGCAAGAATCGTTATATGGCTGAAAAACA
AGACCTTGCCTTCTTTTTAACGGAATATCGAGGAGTCCCTAATCGCATGGATGCCTCCAGTATTGAAAAAATGGTTGGTA
AATACTCTCAAGATTTTAAAATTCGTGTGACTCCCCATAAGTTACGACACACATTAGCCACACGTCTTTATGATGCGACC
AAGTCCCAGGTTTTGGTCAGTCATCAATTGGGGCATGCATCGACTCAAGTTACCGATTTGTATACCCATATTGTTAACGA
TGAACAAAAAAACGCCTTAGACAAATTATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  xerS Streptococcus pneumoniae R6

80.056

100

0.801