Detailed information    

insolico Bioinformatically predicted

Overview

Name   HI0659   Type   Machinery gene
Locus tag   I6H74_RS05145 Genome accession   NZ_CP066069
Coordinates   1036434..1036730 (+) Length   98 a.a.
NCBI ID   WP_027971722.1    Uniprot ID   -
Organism   Streptococcus dysgalactiae strain FDAARGOS_1017     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1031434..1041730
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6H74_RS05100 (I6H74_05095) - 1032258..1032440 (+) 183 WP_000273649.1 hypothetical protein -
  I6H74_RS05105 (I6H74_05100) - 1032538..1032747 (+) 210 WP_046177305.1 hypothetical protein -
  I6H74_RS05115 (I6H74_05110) - 1033992..1034378 (+) 387 WP_232619998.1 hypothetical protein -
  I6H74_RS05120 (I6H74_05115) - 1034375..1034662 (+) 288 WP_046177192.1 hypothetical protein -
  I6H74_RS05125 (I6H74_05120) - 1034701..1035129 (+) 429 WP_053042316.1 hypothetical protein -
  I6H74_RS05130 (I6H74_05125) - 1035122..1035448 (+) 327 WP_046177191.1 hypothetical protein -
  I6H74_RS05135 (I6H74_05130) - 1035466..1035861 (+) 396 WP_046177190.1 hypothetical protein -
  I6H74_RS05140 (I6H74_05135) - 1036079..1036444 (+) 366 WP_046177189.1 type II toxin-antitoxin system RelE/ParE family toxin -
  I6H74_RS05145 (I6H74_05140) HI0659 1036434..1036730 (+) 297 WP_027971722.1 helix-turn-helix transcriptional regulator Machinery gene
  I6H74_RS05150 (I6H74_05145) - 1036752..1037957 (+) 1206 WP_046177188.1 hypothetical protein -
  I6H74_RS05155 (I6H74_05150) - 1037964..1038131 (+) 168 WP_165626014.1 hypothetical protein -
  I6H74_RS05160 (I6H74_05155) sagA 1039007..1039168 (+) 162 WP_012766767.1 TOMM family cytolysin streptolysin S -
  I6H74_RS05165 (I6H74_05160) - 1039387..1040337 (+) 951 WP_003061458.1 SagB family peptide dehydrogenase -
  I6H74_RS05170 (I6H74_05165) - 1040334..1041398 (+) 1065 WP_046177187.1 streptolysin associated protein SagC -

Sequence

Protein


Download         Length: 98 a.a.        Molecular weight: 10758.43 Da        Isoelectric Point: 4.8898

>NTDB_id=453555 I6H74_RS05145 WP_027971722.1 1036434..1036730(+) (HI0659) [Streptococcus dysgalactiae strain FDAARGOS_1017]
MKNNAIGSNWKDVRAELFSKEEILESDMRVAIMSELIEARNEKGISQKKLEEMSGVSQPVIARMETGKTSPQLDTVLKVL
ASLGKTLAVVPIEGEQVS

Nucleotide


Download         Length: 297 bp        

>NTDB_id=453555 I6H74_RS05145 WP_027971722.1 1036434..1036730(+) (HI0659) [Streptococcus dysgalactiae strain FDAARGOS_1017]
ATGAAAAATAATGCTATTGGTAGTAACTGGAAAGATGTAAGAGCTGAATTATTCAGCAAAGAAGAAATTTTGGAAAGTGA
TATGCGCGTGGCTATCATGAGCGAGCTTATCGAGGCTAGAAATGAAAAGGGCATTAGCCAGAAGAAACTAGAGGAGATGA
GTGGTGTTAGTCAACCTGTTATCGCTAGGATGGAAACAGGAAAGACAAGCCCACAGCTTGATACAGTGCTAAAAGTATTG
GCTAGTTTGGGTAAGACTTTAGCTGTTGTACCCATAGAGGGCGAACAGGTAAGCTAG

Domains

Predicted by InterProScan.

Helix-turn-helix (HTH_3)

(37-88)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  HI0659 Haemophilus influenzae Rd KW20

56.044

92.857

0.52