Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiA   Type   Regulator
Locus tag   FOC72_RS05130 Genome accession   NZ_CP054570
Coordinates   1038862..1040823 (-) Length   653 a.a.
NCBI ID   WP_002895613.1    Uniprot ID   A0A859EMR4
Organism   Streptococcus sanguinis strain FDAARGOS_770     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 1033862..1045823
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FOC72_RS05105 (FOC72_05105) proB 1034295..1035404 (-) 1110 WP_032914170.1 glutamate 5-kinase -
  FOC72_RS05110 (FOC72_05110) - 1035520..1036416 (-) 897 WP_002895607.1 RluA family pseudouridine synthase -
  FOC72_RS05115 (FOC72_05115) lspA 1036400..1036867 (-) 468 WP_002895609.1 signal peptidase II -
  FOC72_RS05120 (FOC72_05120) - 1036871..1037773 (-) 903 WP_032908183.1 LysR family transcriptional regulator -
  FOC72_RS05125 (FOC72_05125) - 1037893..1038750 (-) 858 WP_002895611.1 GNAT family N-acetyltransferase -
  FOC72_RS05130 (FOC72_05130) amiA 1038862..1040823 (-) 1962 WP_002895613.1 peptide ABC transporter substrate-binding protein Regulator
  FOC72_RS05135 (FOC72_05135) - 1041109..1043907 (-) 2799 WP_002895614.1 glycoside hydrolase family 3 protein -
  FOC72_RS05140 (FOC72_05140) - 1044144..1044884 (+) 741 WP_002895615.1 hypothetical protein -

Sequence

Protein


Download         Length: 653 a.a.        Molecular weight: 72374.02 Da        Isoelectric Point: 4.6379

>NTDB_id=453496 FOC72_RS05130 WP_002895613.1 1038862..1040823(-) (amiA) [Streptococcus sanguinis strain FDAARGOS_770]
MKASKWLIATGVALSAGLLLTACSQSSSSTNNYTYVYSSDPDSLNYLATNRATTGDVISNLVDGLFENDKYGNLVPSIAK
SWTVSKDGLTYTYKLRDDAKWYTSDGEEYAEVKAQDFVTGLKYAADENSEAIYLVQDSVKGLDAYIKGEDKNFDNVGVKA
IDDHTLQYTLARPEPYWNSKTTSTILFPVNEEFLKAEGSNFGSVKPSSILYNGPYLLKSLTSKSVMEFVKNQNYYDKDNV
TLDSIKLTYYDGNDQEALIRNFSDGVYSTARLYPNSSGFASVKKKYADNIVYSPQDSTSYYYNFNYNRQSYNHTSKTTDA
QKSATNEAIMNKDFRQAINFAFDRTSYGAQGNGEDGATKVLRNTLVPPSFVQIGDKDFGTVVGEKLVNYGSQWQGIDLSD
AQDPYYNPEKAKAKFAEAKQALQAKGVEFPIHLDMPVDQSSTIGVQWASSTKQSIESALGAENVVIDLQKMSTDDLNNIT
YFANSAAQKDYDMSTGGWTGDYQDPSTYLDTLNIKNGGSLQNFGFEPGQDNDKIKELGLDTYTKMLEEANAETNDVQLRY
EKYAEAEAWLLDSGLIIPTVSQGATPSVTKSVPFTKAYSPVGVKGSGYNFKLTKLQKDVVTTKEYEAAKKKWKEEATAAN
KKAQEELADHVEK

Nucleotide


Download         Length: 1962 bp        

>NTDB_id=453496 FOC72_RS05130 WP_002895613.1 1038862..1040823(-) (amiA) [Streptococcus sanguinis strain FDAARGOS_770]
ATGAAAGCATCAAAGTGGCTGATTGCGACTGGAGTTGCACTGAGTGCCGGGCTATTGCTGACGGCTTGTAGCCAGTCTTC
ATCTAGCACAAATAATTATACTTACGTTTATAGTTCAGACCCTGACAGCTTGAACTATCTTGCTACAAACCGTGCAACGA
CAGGTGATGTCATTTCCAACCTGGTCGATGGACTTTTTGAAAATGACAAGTACGGGAATCTAGTTCCCTCAATCGCGAAG
TCATGGACAGTTTCTAAGGACGGTCTGACCTATACTTATAAGCTGCGTGATGATGCTAAATGGTACACATCCGATGGTGA
AGAATATGCAGAAGTAAAAGCCCAGGACTTTGTGACTGGCTTGAAATATGCAGCGGATGAAAATTCTGAAGCTATTTATC
TCGTTCAGGACTCTGTGAAGGGCTTGGATGCTTATATCAAGGGTGAAGATAAGAATTTTGACAATGTTGGTGTCAAGGCT
ATTGATGACCATACCCTGCAATACACTCTGGCCCGCCCTGAGCCTTACTGGAACTCTAAAACAACCAGCACGATTCTCTT
CCCAGTCAATGAAGAGTTTCTGAAAGCAGAAGGAAGCAATTTTGGCTCTGTCAAGCCATCTAGCATCCTCTATAATGGTC
CTTACTTGCTTAAGTCTCTGACTTCCAAGTCTGTGATGGAATTTGTCAAGAACCAAAACTACTATGACAAAGACAATGTC
ACTCTGGATAGTATTAAACTGACCTACTACGATGGAAATGATCAGGAAGCGCTGATTCGTAACTTCAGCGATGGCGTTTA
CAGCACAGCTCGTCTCTATCCGAATAGCTCTGGCTTTGCTTCAGTCAAGAAGAAATATGCGGACAATATCGTGTACAGCC
CGCAGGATTCTACTTCTTATTACTATAATTTCAACTACAACCGTCAGTCTTACAATCATACTTCTAAAACAACAGACGCT
CAAAAATCTGCGACCAACGAAGCAATCATGAACAAGGACTTCCGTCAGGCTATTAACTTTGCCTTTGACCGTACATCTTA
TGGTGCGCAAGGAAATGGTGAAGACGGAGCGACTAAGGTCTTGAGAAATACCTTGGTACCACCTAGCTTTGTTCAAATTG
GCGACAAGGATTTTGGAACTGTTGTTGGAGAAAAATTAGTCAACTATGGCAGCCAATGGCAAGGAATTGACCTCTCTGAC
GCTCAAGACCCTTACTACAATCCTGAAAAGGCTAAGGCGAAATTTGCAGAAGCGAAGCAGGCCTTGCAGGCTAAGGGAGT
TGAATTCCCAATTCACTTAGATATGCCTGTGGATCAGTCTAGCACGATTGGCGTTCAATGGGCTAGCTCAACCAAGCAGT
CTATCGAATCGGCTCTTGGAGCAGAAAATGTCGTCATTGACCTGCAAAAGATGAGCACAGACGACCTTAATAATATCACT
TATTTTGCTAACTCTGCTGCTCAGAAAGACTATGATATGTCTACTGGTGGCTGGACTGGTGACTACCAAGACCCATCTAC
CTATCTTGATACTCTCAATATCAAGAACGGCGGAAGCTTGCAAAACTTTGGTTTTGAGCCAGGTCAAGACAATGATAAGA
TTAAAGAGCTAGGCTTGGATACTTATACCAAGATGCTGGAAGAAGCTAATGCTGAAACCAACGATGTGCAGTTGCGTTAC
GAAAAGTATGCAGAAGCGGAAGCTTGGTTGCTAGATAGTGGCTTGATTATCCCGACTGTTTCACAAGGGGCAACACCGTC
TGTTACTAAATCAGTGCCATTTACAAAGGCCTACTCACCAGTTGGTGTTAAAGGTTCAGGCTACAACTTCAAGCTGACTA
AGCTTCAGAAGGATGTTGTAACGACCAAAGAATACGAAGCAGCTAAGAAAAAATGGAAAGAAGAAGCTACTGCGGCAAAT
AAAAAAGCCCAGGAAGAACTTGCTGACCACGTTGAAAAATAA

Domains

Predicted by InterproScan.

Bacterial extracellular solute-binding proteins, family 5 Middle (SBP_bac_5)

(74-517)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A859EMR4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiA Streptococcus salivarius strain HSISS4

55.793

100

0.56
  amiA3 Streptococcus thermophilus LMD-9

55.403

100

0.557
  amiA3 Streptococcus thermophilus LMG 18311

55.251

100

0.556