Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   FOC72_RS02870 Genome accession   NZ_CP054570
Coordinates   578364..579164 (+) Length   266 a.a.
NCBI ID   WP_002894939.1    Uniprot ID   -
Organism   Streptococcus sanguinis strain FDAARGOS_770     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 573364..584164
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FOC72_RS02845 (FOC72_02845) - 573693..574373 (-) 681 WP_002894931.1 amino acid ABC transporter permease -
  FOC72_RS02850 (FOC72_02850) - 574386..575198 (-) 813 WP_002894933.1 transporter substrate-binding domain-containing protein -
  FOC72_RS02855 (FOC72_02855) - 575213..575974 (-) 762 WP_002894934.1 amino acid ABC transporter ATP-binding protein -
  FOC72_RS02860 (FOC72_02860) micA 576314..577015 (+) 702 WP_002894937.1 response regulator YycF Regulator
  FOC72_RS02865 (FOC72_02865) micB 577008..578354 (+) 1347 WP_002894938.1 cell wall metabolism sensor histidine kinase VicK Regulator
  FOC72_RS02870 (FOC72_02870) vicX 578364..579164 (+) 801 WP_002894939.1 MBL fold metallo-hydrolase Regulator
  FOC72_RS02875 (FOC72_02875) - 579256..579615 (+) 360 WP_002894940.1 DUF454 family protein -
  FOC72_RS02880 (FOC72_02880) rnc 579737..580435 (+) 699 WP_002894942.1 ribonuclease III -
  FOC72_RS02885 (FOC72_02885) smc 580426..583962 (+) 3537 WP_002894944.1 chromosome segregation protein SMC -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 29705.64 Da        Isoelectric Point: 6.0734

>NTDB_id=453492 FOC72_RS02870 WP_002894939.1 578364..579164(+) (vicX) [Streptococcus sanguinis strain FDAARGOS_770]
MTKGFQYSILASGSSGNCFYLETDQKRILVDAGLSGKKITSLLGEIGRKPEDLDAILVTHEHKDHIHGVGVLARKYHLDI
YANEATWKAMEKDLGKLDASQKHIFELGKTKTFGDLDVESFGVSHDAVCPQFYRFMKDDKSFVMLTDTGYVSDRMAGIIE
NADGYLIESNHDIEILRSGAYPWSLKQRILSDMGHLSNEDGAETMIRTLGNRTKRIYLGHLSKENNIKELAHMTMVNQLA
QADMAVGHDFQVYDTSPDTATPLTSI

Nucleotide


Download         Length: 801 bp        

>NTDB_id=453492 FOC72_RS02870 WP_002894939.1 578364..579164(+) (vicX) [Streptococcus sanguinis strain FDAARGOS_770]
ATGACTAAAGGATTTCAATACAGTATTCTGGCGTCAGGATCAAGCGGTAATTGTTTCTATCTGGAAACAGACCAAAAGCG
GATTCTGGTTGACGCTGGCTTATCAGGCAAGAAAATTACTAGTTTGTTGGGCGAAATTGGCCGCAAGCCTGAGGATTTGG
ATGCTATTTTAGTGACTCATGAGCACAAGGATCACATTCATGGTGTTGGTGTATTGGCCCGCAAGTATCATCTGGATATT
TATGCTAATGAGGCCACTTGGAAGGCTATGGAAAAGGACTTGGGCAAGCTGGATGCGAGCCAAAAGCATATCTTTGAATT
GGGAAAGACCAAGACCTTTGGAGACTTGGATGTGGAGAGCTTTGGTGTCAGTCATGACGCAGTCTGTCCACAATTTTACC
GTTTTATGAAGGATGACAAGAGTTTTGTCATGCTGACGGATACGGGCTATGTCAGTGACCGGATGGCTGGGATTATCGAA
AATGCCGACGGGTACCTGATTGAGAGCAACCATGATATTGAAATTCTTCGCAGCGGTGCCTACCCATGGAGTCTCAAGCA
GCGAATTCTGTCGGATATGGGTCACTTGTCCAATGAAGATGGAGCAGAGACCATGATTCGGACTCTAGGCAATCGCACCA
AGCGAATCTATCTGGGGCATCTCAGTAAGGAAAATAATATCAAGGAATTGGCTCACATGACCATGGTCAATCAACTGGCT
CAAGCCGATATGGCAGTCGGCCACGATTTCCAGGTCTATGATACCTCGCCTGATACCGCGACACCTTTGACGAGTATTTA
G

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(14-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

80.989

98.872

0.801