Detailed information    

insolico Bioinformatically predicted

Overview

Name   comGG/cglG   Type   Machinery gene
Locus tag   I6H72_RS07495 Genome accession   NZ_CP066055
Coordinates   1475513..1475839 (+) Length   108 a.a.
NCBI ID   WP_018543596.1    Uniprot ID   -
Organism   Streptococcus constellatus strain FDAARGOS_1015     
Function   dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1470513..1480839
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6H72_RS07460 (I6H72_07460) - 1471804..1472124 (+) 321 WP_198457773.1 DUF1033 family protein -
  I6H72_RS07465 (I6H72_07465) comGA 1472239..1473180 (+) 942 WP_006268058.1 competence type IV pilus ATPase ComGA Machinery gene
  I6H72_RS07470 (I6H72_07470) comGB 1473122..1474144 (+) 1023 WP_037592679.1 competence type IV pilus assembly protein ComGB Machinery gene
  I6H72_RS07475 (I6H72_07475) comGC 1474141..1474458 (+) 318 WP_020998068.1 competence type IV pilus major pilin ComGC Machinery gene
  I6H72_RS07480 (I6H72_07480) comGD 1474418..1474846 (+) 429 WP_020999411.1 competence type IV pilus minor pilin ComGD Machinery gene
  I6H72_RS07485 (I6H72_07485) comGE/cglE 1474818..1475111 (+) 294 WP_003035318.1 competence type IV pilus minor pilin ComGE Machinery gene
  I6H72_RS07490 (I6H72_07490) comGF/cglF 1475095..1475532 (+) 438 WP_198457774.1 competence type IV pilus minor pilin ComGF Machinery gene
  I6H72_RS07495 (I6H72_07495) comGG/cglG 1475513..1475839 (+) 327 WP_018543596.1 competence type IV pilus minor pilin ComGG Machinery gene
  I6H72_RS07500 (I6H72_07500) comGH 1475924..1476877 (+) 954 WP_198457775.1 class I SAM-dependent methyltransferase Machinery gene
  I6H72_RS07505 (I6H72_07505) - 1476924..1478123 (+) 1200 WP_198457776.1 acetate kinase -
  I6H72_RS07510 (I6H72_07510) glmS 1478513..1480327 (+) 1815 WP_198458429.1 glutamine--fructose-6-phosphate transaminase (isomerizing) -

Sequence

Protein


Download         Length: 108 a.a.        Molecular weight: 12701.68 Da        Isoelectric Point: 10.6290

>NTDB_id=453359 I6H72_RS07495 WP_018543596.1 1475513..1475839(+) (comGG/cglG) [Streptococcus constellatus strain FDAARGOS_1015]
MWKQRVKAGIMLYALFITAVFSLLLQFYLHRQTANHRNFALNKEGTQAYTMALLANKNSKQREFDKGHVQDQKSEKELIL
TVTMKTGRRYQFSFPLEKTSQNNDKLDK

Nucleotide


Download         Length: 327 bp        

>NTDB_id=453359 I6H72_RS07495 WP_018543596.1 1475513..1475839(+) (comGG/cglG) [Streptococcus constellatus strain FDAARGOS_1015]
GTGTGGAAACAAAGAGTTAAAGCAGGTATTATGCTCTATGCCCTTTTTATAACAGCTGTCTTTAGCTTGCTTTTGCAATT
TTACCTTCATCGGCAAACTGCTAATCACAGGAATTTTGCTTTGAACAAAGAAGGAACACAGGCTTATACAATGGCTCTTC
TAGCAAATAAAAATTCTAAGCAAAGAGAATTTGATAAAGGGCATGTCCAAGACCAAAAGAGTGAGAAAGAGCTCATCCTG
ACCGTAACAATGAAGACTGGTCGCCGTTATCAATTTTCTTTTCCGCTTGAGAAGACCAGCCAAAACAATGACAAACTAGA
CAAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comGG/cglG Streptococcus mitis NCTC 12261

44.554

93.519

0.417
  comGG/cglG Streptococcus mitis SK321

44.554

93.519

0.417
  comGG/cglG Streptococcus pneumoniae Rx1

43

92.593

0.398
  comGG/cglG Streptococcus pneumoniae D39

43

92.593

0.398
  comGG/cglG Streptococcus pneumoniae R6

43

92.593

0.398
  comGG/cglG Streptococcus pneumoniae TIGR4

43

92.593

0.398
  comGG Streptococcus mutans UA140

36.697

100

0.37
  comGG Streptococcus mutans UA159

36.697

100

0.37