Detailed information    

insolico Bioinformatically predicted

Overview


Name   hexA   Type   Machinery gene
Locus tag   I6H76_RS06125 Genome accession   NZ_CP065994
Coordinates   1178778..1181345 (+) Length   855 a.a.
NCBI ID   WP_006531421.1    Uniprot ID   A0ABM9XFU2
Organism   Streptococcus infantarius strain FDAARGOS_1019     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context


Location: 1173778..1186345
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6H76_RS06100 (I6H76_06100) - 1174263..1175681 (+) 1419 WP_006531427.1 prolyl oligopeptidase family serine peptidase -
  I6H76_RS10090 - 1175710..1175901 (-) 192 WP_006531426.1 bacteriocin immunity protein -
  I6H76_RS06110 (I6H76_06110) argS 1176123..1177814 (-) 1692 WP_006531424.1 arginine--tRNA ligase -
  I6H76_RS06115 (I6H76_06115) argR 1178004..1178441 (+) 438 WP_006531423.1 arginine repressor -
  I6H76_RS06120 (I6H76_06120) - 1178438..1178791 (+) 354 WP_006531422.1 YlbF family regulator -
  I6H76_RS06125 (I6H76_06125) hexA 1178778..1181345 (+) 2568 WP_006531421.1 DNA mismatch repair protein MutS Machinery gene
  I6H76_RS06130 (I6H76_06130) hexB 1181465..1183405 (+) 1941 WP_006531420.1 DNA mismatch repair endonuclease MutL Machinery gene
  I6H76_RS06135 (I6H76_06135) ruvA 1183406..1183999 (+) 594 WP_006531419.1 Holliday junction branch migration protein RuvA Machinery gene
  I6H76_RS06140 (I6H76_06140) - 1184029..1184586 (+) 558 WP_043878298.1 DNA-3-methyladenine glycosylase I -
  I6H76_RS06145 (I6H76_06145) - 1184709..1185911 (+) 1203 WP_006531417.1 MFS transporter -

Sequence


Protein


Download         Length: 855 a.a.        Molecular weight: 96033.19 Da        Isoelectric Point: 4.8914

>NTDB_id=452822 I6H76_RS06125 WP_006531421.1 1178778..1181345(+) (hexA) [Streptococcus infantarius strain FDAARGOS_1019]
MAKDKISPGMQQYLDVKKDYPDAFLLFRMGDFYELFYEDAVKAAQILEISLTSRNKNADNPIPMAGVPYHSAQQYIDVLV
EMGYKVAIAEQMEDPKQAVGVVKREVVQVITPGTAVDSSKPDNANNFLVAIDSDGKNFGLAYMDVSTGEFYATSLSDFTS
LKSEILNLKAREIVVGYDLSEDEQHSLVKQLNLLLSFEQERYEDVHLIDLNLTALEISAAEKLLQYVHTTQKRELSHLQK
LVHYEIKDYLQMSYTTKSSLDLLENARTSKKHGSLYWLLDETKTAMGMRLLRNWIDRPLVNQEQIEERQNIVQVFLDNFF
ERSDLTDSLKGVYDIERLASRVSFGKANPKDLLQLGHTLGQVPTIKAILESFDSPYLDKLVNSIDTLPELESLISSAIDP
DAQAVITEGSIIRTGFDETLDKYRKVMREGTSWIAEIEAKERAASGITNLKIDYNKKDGYYFHVTNSNLSLVPDYFFRKA
TLKNSERFGTAELAKIEGEMLEAREQSASLEYDIFMRVRAQVERYISRLQDLAKAISTVDVLQSLAVVAENNHYVRPSFN
DSHEIKIEKGRHAVVEKVMGTQEYIPNTITFGRNTNIQLITGPNMSGKSTYMRQLALTVIMAQMGSYVAAESVSLPVFDA
IFTRIGAADDLISGQSTFMVEMMEANQAIKRASEKSLILFDELGRGTATYDGMALAQSIIEYIHDHIRAKTMFATHYHEL
TSLSTALTHLVNVHVATLERNGDVTFLHKIAEGPADKSYGIHVAKIAGLPEDLLQRANSILTNLESGAAQLHLTAETEEK
TQVKTEAAEPVAEQLSLFADDSSNQEVIEALKKVDLMNLTPMQAMNVIYELKNML

Nucleotide


Download         Length: 2568 bp        

>NTDB_id=452822 I6H76_RS06125 WP_006531421.1 1178778..1181345(+) (hexA) [Streptococcus infantarius strain FDAARGOS_1019]
ATGGCAAAAGATAAAATTTCTCCAGGCATGCAACAGTATTTGGATGTCAAAAAAGACTATCCAGATGCTTTTTTACTTTT
CCGCATGGGAGACTTTTACGAACTATTTTATGAGGATGCTGTTAAGGCGGCACAGATTTTAGAGATTAGTTTAACTAGTC
GTAATAAAAATGCTGACAATCCTATTCCAATGGCTGGTGTTCCTTATCATTCAGCCCAACAATACATTGATGTCTTAGTT
GAGATGGGGTATAAGGTTGCCATTGCTGAGCAGATGGAAGATCCGAAGCAGGCAGTTGGTGTGGTTAAGCGTGAAGTCGT
TCAGGTGATTACACCAGGGACAGCGGTTGATTCTTCTAAGCCAGATAATGCTAATAATTTCTTGGTAGCTATTGATTCTG
ATGGCAAAAACTTTGGTTTGGCTTATATGGATGTGTCAACGGGTGAGTTTTACGCGACAAGTTTGTCTGATTTTACAAGC
CTAAAAAGTGAGATTTTAAACCTCAAGGCTCGTGAAATCGTGGTTGGTTATGACCTTTCTGAAGATGAGCAACACAGCTT
GGTTAAACAACTCAATCTCTTATTATCGTTTGAGCAAGAGCGCTATGAAGATGTGCATTTGATTGACCTGAATTTAACAG
CGTTAGAGATTTCTGCTGCTGAAAAATTACTTCAATACGTTCATACGACACAAAAACGTGAACTCAGTCACCTGCAAAAG
CTGGTTCACTATGAAATCAAAGACTATCTTCAAATGTCTTATACGACAAAATCAAGTCTTGATTTACTAGAAAATGCCCG
CACAAGCAAGAAGCACGGTAGTCTTTACTGGTTGCTTGATGAAACTAAGACGGCTATGGGGATGCGTTTGTTGCGTAACT
GGATTGATCGTCCATTGGTTAATCAAGAACAAATTGAGGAACGCCAAAATATTGTCCAAGTTTTCTTAGACAACTTCTTT
GAACGTAGTGATTTGACGGACAGTCTAAAAGGCGTTTATGATATTGAGCGTTTGGCTAGTCGTGTGTCATTTGGAAAAGC
CAATCCAAAAGATTTGCTTCAACTTGGTCACACTTTGGGACAAGTGCCAACTATTAAAGCTATCTTGGAATCTTTTGATA
GTCCTTACCTTGACAAGCTTGTCAACAGCATTGACACTTTACCAGAGCTAGAGTCATTGATTAGCTCTGCTATTGACCCA
GATGCTCAAGCAGTGATTACGGAAGGAAGTATTATCAGAACTGGTTTTGATGAGACTTTGGACAAATATCGTAAAGTCAT
GCGCGAAGGGACAAGCTGGATTGCTGAGATTGAAGCCAAAGAACGTGCGGCAAGTGGTATTACAAACCTAAAAATTGATT
ACAATAAAAAAGATGGTTACTATTTCCATGTAACAAATTCTAACCTTTCTTTGGTGCCAGATTACTTCTTCCGTAAAGCA
ACTTTGAAGAATTCAGAGCGTTTTGGTACGGCAGAATTAGCTAAAATTGAAGGTGAAATGCTTGAGGCGCGTGAGCAATC
AGCGAGTCTGGAATACGATATTTTCATGCGCGTTCGCGCACAGGTGGAACGTTATATTTCACGTCTGCAAGATTTGGCAA
AAGCTATTTCTACAGTCGATGTTCTGCAAAGTTTGGCAGTGGTTGCGGAAAACAACCATTATGTTCGTCCAAGCTTTAAT
GATAGCCATGAAATAAAGATTGAAAAAGGTCGCCATGCGGTTGTTGAAAAAGTCATGGGTACGCAAGAATATATCCCAAA
TACCATCACATTTGGCAGAAATACTAATATTCAGCTGATTACTGGTCCAAATATGAGTGGTAAGTCAACTTATATGCGTC
AGTTAGCTTTGACGGTTATCATGGCGCAGATGGGGTCATACGTTGCTGCTGAGAGTGTCAGTCTTCCCGTTTTTGATGCG
ATTTTCACACGTATTGGTGCGGCGGATGATTTGATTTCAGGTCAATCAACCTTTATGGTGGAAATGATGGAAGCCAACCA
AGCCATCAAACGAGCCAGTGAAAAATCTTTGATTCTCTTTGATGAATTGGGACGCGGGACAGCAACTTACGATGGAATGG
CTTTAGCACAATCTATTATTGAGTATATCCACGATCACATTCGTGCTAAGACCATGTTTGCGACCCATTATCATGAGTTG
ACATCGCTGTCAACTGCCTTGACACACCTTGTCAACGTCCATGTTGCAACGCTTGAACGTAATGGTGATGTGACTTTCCT
TCATAAAATCGCAGAAGGACCAGCTGACAAATCTTATGGTATTCACGTTGCGAAAATTGCAGGTTTGCCAGAAGATTTGT
TGCAACGAGCAAATAGTATTTTAACCAATCTCGAATCAGGTGCTGCGCAGCTTCATTTGACAGCAGAAACTGAAGAGAAA
ACTCAAGTGAAGACAGAAGCGGCAGAACCTGTTGCAGAGCAGCTTAGCTTATTTGCAGATGACTCAAGTAACCAAGAAGT
GATTGAAGCTCTTAAAAAAGTGGACTTGATGAATCTAACACCAATGCAAGCTATGAATGTCATTTATGAATTGAAAAACA
TGTTATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  hexA Streptococcus pneumoniae R6

72.982

100

0.73

  mutS Pseudomonas stutzeri strain ATCC 17587

37.14

100

0.377