Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   I6H76_RS01010 Genome accession   NZ_CP065994
Coordinates   200700..201362 (+) Length   220 a.a.
NCBI ID   WP_006532126.1    Uniprot ID   A0ABM9XE00
Organism   Streptococcus infantarius strain FDAARGOS_1019     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 195700..206362
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6H76_RS00995 (I6H76_00995) - 196596..197417 (+) 822 WP_006532129.1 sugar phosphate isomerase/epimerase -
  I6H76_RS01000 (I6H76_01000) - 197868..198620 (+) 753 WP_006532128.1 ABC transporter ATP-binding protein -
  I6H76_RS01005 (I6H76_01005) - 198622..200598 (+) 1977 WP_043878368.1 FtsX-like permease family protein -
  I6H76_RS01010 (I6H76_01010) braR 200700..201362 (+) 663 WP_006532126.1 response regulator transcription factor Regulator
  I6H76_RS01015 (I6H76_01015) - 201359..202306 (+) 948 WP_006532125.1 HAMP domain-containing sensor histidine kinase -
  I6H76_RS01020 (I6H76_01020) - 202390..203070 (+) 681 WP_006532124.1 XRE family transcriptional regulator -
  I6H76_RS01025 (I6H76_01025) xerS 203168..204238 (-) 1071 WP_014334723.1 tyrosine recombinase XerS Machinery gene
  I6H76_RS10345 - 204845..205006 (-) 162 WP_081442281.1 ATP-binding cassette domain-containing protein -
  I6H76_RS01035 (I6H76_01035) - 204983..205783 (+) 801 WP_006532121.1 AraC family transcriptional regulator -

Sequence

Protein


Download         Length: 220 a.a.        Molecular weight: 25499.33 Da        Isoelectric Point: 5.1333

>NTDB_id=452762 I6H76_RS01010 WP_006532126.1 200700..201362(+) (braR) [Streptococcus infantarius strain FDAARGOS_1019]
MKQGKIYIVEDDNTIVTLLKQHLSKVYDVFSVNNFRAIKQEIEEIKPDLILMDITLPYFNGFYWTTEIRKTMTLPIIFIS
SSDDEMDTVMALNMGGDDFISKPFSLTILDAKISAFLRRAYQFTSDNYQLDEFSLSREGILSNGSKQINLSPTENKILSI
LFEHQNQVVPKEELLEKLWENESFIDQNTLSVNMTRLRKKVQPLGFDRIHTVRGVGYLLK

Nucleotide


Download         Length: 663 bp        

>NTDB_id=452762 I6H76_RS01010 WP_006532126.1 200700..201362(+) (braR) [Streptococcus infantarius strain FDAARGOS_1019]
ATGAAACAAGGAAAAATTTATATCGTAGAAGATGACAACACCATTGTAACTCTATTAAAACAGCATTTAAGCAAAGTTTA
TGATGTCTTTAGCGTTAATAATTTTCGTGCGATTAAGCAAGAAATCGAAGAAATTAAGCCTGATTTGATTTTGATGGATA
TCACTTTGCCTTATTTCAATGGTTTTTATTGGACAACAGAAATTCGTAAAACGATGACTTTACCAATTATCTTTATCTCA
TCCAGCGATGATGAAATGGATACTGTTATGGCACTTAATATGGGAGGAGACGATTTTATTTCTAAACCCTTCTCATTGAC
TATCTTAGATGCTAAGATATCAGCTTTTTTGCGTAGAGCCTATCAATTCACTTCCGACAACTATCAACTCGATGAATTTT
CGTTATCACGTGAAGGAATTTTATCAAATGGGAGCAAGCAGATTAACCTTTCTCCAACAGAAAATAAAATCCTTAGTATT
CTATTTGAACACCAAAATCAAGTTGTGCCAAAGGAAGAGTTGTTAGAGAAATTGTGGGAAAACGAAAGTTTTATTGACCA
AAACACCTTAAGTGTCAATATGACACGCTTACGTAAAAAAGTTCAACCATTAGGATTTGATCGCATTCATACCGTGAGAG
GAGTCGGTTATCTTTTAAAATGA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(146-219)

Response regulator receiver domain (Response_reg)

(6-113)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

47.706

99.091

0.473
  vicR Streptococcus mutans UA159

34.783

100

0.364