Detailed information    

insolico Bioinformatically predicted

Overview

Name   comP   Type   Regulator
Locus tag   HT132_RS05655 Genome accession   NZ_CP054479
Coordinates   1113139..1115430 (+) Length   763 a.a.
NCBI ID   WP_099721970.1    Uniprot ID   A0AAP3YH63
Organism   Bacillus amyloliquefaciens strain R8-25     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context

Location: 1108139..1120430
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HT132_RS05630 (HT132_05630) - 1109723..1110946 (+) 1224 WP_014418766.1 EAL and HDOD domain-containing protein -
  HT132_RS05635 (HT132_05635) - 1110953..1111294 (-) 342 WP_021495366.1 hypothetical protein -
  HT132_RS05640 (HT132_05640) degQ 1111760..1111900 (+) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  HT132_RS05645 (HT132_05645) - 1112085..1112963 (+) 879 WP_032860494.1 polyprenyl synthetase family protein -
  HT132_RS05650 (HT132_05650) comX 1112963..1113127 (+) 165 WP_007613432.1 competence pheromone ComX -
  HT132_RS05655 (HT132_05655) comP 1113139..1115430 (+) 2292 WP_099721970.1 histidine kinase Regulator
  HT132_RS05660 (HT132_05660) comA 1115511..1116155 (+) 645 WP_014418762.1 response regulator transcription factor Regulator
  HT132_RS05665 (HT132_05665) - 1116177..1116560 (+) 384 WP_104842774.1 hotdog fold thioesterase -
  HT132_RS05670 (HT132_05670) mnhG 1116600..1116974 (-) 375 WP_003152056.1 monovalent cation/H(+) antiporter subunit G -
  HT132_RS05675 (HT132_05675) - 1116958..1117242 (-) 285 WP_012118311.1 Na(+)/H(+) antiporter subunit F1 -
  HT132_RS05680 (HT132_05680) - 1117242..1117718 (-) 477 WP_174532427.1 Na+/H+ antiporter subunit E -
  HT132_RS05685 (HT132_05685) - 1117724..1119204 (-) 1481 Protein_1089 Na+/H+ antiporter subunit D -
  HT132_RS05690 (HT132_05690) - 1119197..1119538 (-) 342 WP_003152063.1 Na(+)/H(+) antiporter subunit C -
  HT132_RS05695 (HT132_05695) - 1119538..1119969 (-) 432 WP_007613424.1 Na(+)/H(+) antiporter subunit B -

Sequence

Protein


Download         Length: 763 a.a.        Molecular weight: 88362.60 Da        Isoelectric Point: 7.5862

>NTDB_id=452759 HT132_RS05655 WP_099721970.1 1113139..1115430(+) (comP) [Bacillus amyloliquefaciens strain R8-25]
MKSKYNKISVVLILLTLVYVIYLTYISTNNLLVGATISENKQGEIKIKDVEDFTMAYYAGVQKGDIVKNINGQNVKSINI
QMNKLKNVNSMVVDRNGHDIEIKLNLFNDRNFSTYLIPIIFYVVCLFCCFFIIKINEEKNLKSALVLIVFLLSASIAYIS
AGGSAKGDLLSRCIMLLTLITVPLNYLLFLYHYFKELGTVLFSKKVFVLYLFPTINILFELFRSRLSFGDFIPKFNLISF
FLLFLVVAYYFIVILRRNKDTDQAHIIKVLVVINILAFSPFLCLYLIPYVFFNDYYVSSFLTASFMLLIPFSLVYQFMSN
KIYNVDFILSKLKYYGFLALTPTIILVTTIELLREPEENFYNLKLTFLIYILMLAVFYYKEILDFRFKLKRVSERFNYQD
SIYKFTQLIRNSSSLNQVFGELKTTILEVTLTSKVYIFEVTYDGNVKAFDERDSSLIDDYQVLLNSVTVEIGKITEFNQG
FAMKVGERGDRSFVVLCLSKMNTPRLSREEISWLKTLSFYVNVSIENVMKIEELMNHLEDLKKQETNPVWLKKLMFTIEE
KQRSDLARDLHDSVLQDLISLKRQCELFLADFKKEEPCQLEVQDKLHQMNEQMSDVILMTRETCHELRPQLLYDLGLVKA
VSKLAAQQQERAPFHIRLNTGRFTAALDLDTQLNLYRIIQEFLSNAMKHSKANEVLIMLISIQNKVILHYEDDGVGCNQE
EGGGQSMSMGLSGIKERVRALDGRMKIDTSEGNGFKADIEMEL

Nucleotide


Download         Length: 2292 bp        

>NTDB_id=452759 HT132_RS05655 WP_099721970.1 1113139..1115430(+) (comP) [Bacillus amyloliquefaciens strain R8-25]
ATGAAGTCCAAGTACAATAAGATTTCAGTTGTCTTAATTCTGCTTACATTGGTATATGTCATTTATCTGACTTATATAAG
CACAAATAATCTTTTAGTCGGCGCCACCATTTCTGAAAATAAACAGGGCGAAATTAAAATAAAAGATGTAGAAGATTTTA
CAATGGCATATTACGCCGGAGTGCAAAAGGGAGATATAGTAAAGAATATTAACGGCCAAAATGTAAAGTCAATTAATATT
CAAATGAATAAGCTGAAAAATGTAAACTCGATGGTCGTTGATAGAAACGGTCATGATATTGAGATTAAGCTCAATTTATT
TAATGATAGGAACTTCAGTACTTACTTAATACCGATAATTTTTTATGTAGTATGTTTATTTTGCTGCTTCTTCATCATCA
AGATAAATGAAGAAAAAAACTTAAAATCTGCTTTGGTGCTAATTGTATTTCTTTTGTCTGCTTCAATCGCATATATCAGT
GCTGGAGGATCGGCAAAAGGCGATTTGCTTAGCAGATGCATCATGTTGTTAACATTAATAACTGTACCTTTAAATTATCT
TCTGTTTCTTTATCATTACTTTAAAGAATTAGGTACAGTGCTTTTCAGCAAAAAAGTTTTCGTTTTGTATTTATTTCCAA
CTATAAATATATTATTTGAATTATTTCGGTCGCGATTATCTTTTGGTGATTTTATTCCAAAATTTAATTTGATTTCGTTT
TTTCTTCTTTTTTTGGTTGTAGCATATTACTTTATTGTTATTTTGAGAAGAAACAAAGATACTGACCAGGCACATATTAT
AAAGGTGCTTGTGGTTATAAATATATTGGCATTTTCGCCTTTTTTATGTCTGTATCTTATACCGTATGTATTTTTTAATG
ATTATTATGTCTCTTCTTTCTTAACAGCATCATTTATGCTGCTGATACCTTTTTCACTTGTATATCAATTCATGTCGAAT
AAAATATATAACGTTGATTTTATCTTAAGTAAGTTAAAATATTACGGCTTTTTAGCGTTAACCCCAACTATAATTCTGGT
TACGACAATTGAGTTATTACGTGAGCCGGAAGAAAATTTTTACAATCTCAAACTGACATTTTTAATTTATATTTTAATGT
TAGCTGTTTTTTATTATAAAGAAATACTCGATTTCCGGTTTAAATTAAAAAGGGTCTCTGAAAGATTCAATTACCAAGAC
AGTATTTATAAGTTTACCCAATTAATCAGAAACTCGTCTTCTTTAAATCAGGTTTTTGGAGAATTAAAAACCACCATTCT
CGAAGTAACTCTTACAAGTAAAGTGTATATATTTGAAGTTACGTATGATGGGAATGTAAAGGCATTTGACGAAAGAGATT
CAAGTTTGATAGATGATTATCAAGTGCTTTTAAATAGTGTTACTGTTGAAATAGGAAAAATAACGGAGTTTAATCAAGGT
TTCGCAATGAAAGTAGGAGAACGGGGAGATAGATCATTCGTTGTTCTCTGTTTGTCTAAGATGAATACGCCTCGTTTATC
ACGTGAAGAAATTTCTTGGTTAAAAACATTATCTTTTTACGTTAATGTTTCCATAGAAAACGTGATGAAAATCGAAGAAC
TTATGAATCATCTCGAAGATTTAAAGAAACAAGAGACAAACCCGGTCTGGCTCAAAAAGCTGATGTTTACGATCGAGGAA
AAGCAGCGGTCGGATCTGGCCCGTGATCTGCATGATTCAGTGCTGCAGGACTTGATTTCTTTGAAGCGCCAGTGTGAGCT
GTTTCTGGCCGATTTTAAGAAAGAGGAGCCTTGCCAGTTAGAGGTGCAGGACAAGCTTCATCAGATGAATGAGCAGATGT
CGGATGTCATTTTGATGACCCGGGAGACGTGCCATGAGCTGCGTCCTCAGCTGCTGTATGATTTGGGTCTGGTCAAGGCG
GTATCCAAGCTTGCCGCGCAGCAGCAGGAGCGTGCGCCGTTTCATATCCGTCTGAATACGGGCCGGTTTACGGCGGCGCT
GGATTTGGATACACAGCTGAATTTGTACCGCATCATTCAGGAATTTCTTTCGAACGCCATGAAGCATTCAAAGGCGAATG
AGGTGCTGATTATGCTGATCAGCATTCAAAATAAAGTGATTCTGCATTATGAAGACGACGGTGTCGGCTGCAATCAGGAA
GAAGGCGGCGGGCAGTCGATGAGCATGGGTCTTTCGGGTATTAAGGAGCGTGTCCGGGCGCTTGACGGACGGATGAAAAT
CGACACAAGTGAAGGAAACGGTTTTAAAGCGGATATTGAAATGGAATTGTAA

Domains

Predicted by InterproScan.

Histidine kinase (HisKA_3)

(563-632)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

53.896

100

0.544