Detailed information    

insolico Bioinformatically predicted

Overview


Name   pptB   Type   Regulator
Locus tag   HRE60_RS07640 Genome accession   NZ_CP054153
Coordinates   1716855..1717892 (-) Length   345 a.a.
NCBI ID   WP_181670645.1    Uniprot ID   A0A7L6WLD0
Organism   Streptococcus salivarius strain DB-B5     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1711855..1722892
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HRE60_RS07615 (HRE60_07615) ilvD 1712126..1713829 (-) 1704 WP_002884316.1 dihydroxy-acid dehydratase -
  HRE60_RS07620 (HRE60_07620) - 1713957..1715138 (+) 1182 WP_181670644.1 NAD(P)/FAD-dependent oxidoreductase -
  HRE60_RS07630 (HRE60_07630) trmB 1715355..1715996 (-) 642 WP_151404302.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  HRE60_RS07635 (HRE60_07635) - 1716006..1716797 (-) 792 WP_002884270.1 phosphotransferase family protein -
  HRE60_RS07640 (HRE60_07640) pptB 1716855..1717892 (-) 1038 WP_181670645.1 ABC transporter permease Regulator
  HRE60_RS07645 (HRE60_07645) pptA 1717889..1718620 (-) 732 WP_181670646.1 ABC transporter ATP-binding protein Regulator
  HRE60_RS07650 (HRE60_07650) - 1718685..1719104 (+) 420 WP_181670647.1 HIT family protein -
  HRE60_RS07655 (HRE60_07655) - 1719101..1719400 (+) 300 WP_084871000.1 hypothetical protein -
  HRE60_RS07660 (HRE60_07660) - 1719487..1719942 (-) 456 WP_238799460.1 glutaredoxin domain-containing protein -
  HRE60_RS07665 (HRE60_07665) - 1719932..1720372 (-) 441 WP_238799464.1 excalibur calcium-binding domain-containing protein -

Sequence


Protein


Download         Length: 345 a.a.        Molecular weight: 40075.51 Da        Isoelectric Point: 10.4626

>NTDB_id=451183 HRE60_RS07640 WP_181670645.1 1716855..1717892(-) (pptB) [Streptococcus salivarius strain DB-B5]
MIAELFKERSKRFNARCAKYSRYVFNDHFILVLLFLLGFVLVQYSQLLKHFPKNPWAIILGLLMLCLLLPFWGNIATYLE
PADKHYLLVKEEEVLDHVKKATERAFRFWVIVQSLIFILAIPLFLALGVPVWGVILVAVAMAILKYFIFQKKAQPFYKQS
GLNWTEAIAAENKRQQSILKFFSLFTNVKGITSSVKRRAYLDGILKRTKKDKEHTWYNLYLRAFLRSGDYFALSLRLFAL
TLLVIFLVPEKWLAMVLVVVFDYLLLFQLTALKSHFAYQRMANLMPVGKDMQVSNLKRLISQIVLVLTLVQAVCLFDLKF
SLILVGMMLVLSLVYLPAKLKKMID

Nucleotide


Download         Length: 1038 bp        

>NTDB_id=451183 HRE60_RS07640 WP_181670645.1 1716855..1717892(-) (pptB) [Streptococcus salivarius strain DB-B5]
ATGATAGCTGAGCTTTTTAAGGAGCGTAGCAAGCGATTCAATGCCCGCTGTGCTAAGTATAGTCGCTACGTCTTTAATGA
TCACTTTATCTTGGTTCTCCTCTTTCTTTTAGGTTTCGTCTTGGTGCAGTATAGCCAATTGCTGAAACATTTTCCAAAGA
ATCCATGGGCAATCATTCTTGGCTTGCTTATGCTTTGTCTGTTATTGCCTTTTTGGGGTAATATTGCGACTTATTTAGAG
CCAGCTGATAAGCATTACCTTTTGGTGAAGGAAGAAGAGGTGTTAGACCATGTTAAGAAGGCAACAGAGCGTGCTTTTAG
ATTTTGGGTAATCGTACAAAGCCTGATTTTTATTTTGGCTATTCCGCTCTTTTTAGCCTTGGGAGTTCCAGTTTGGGGAG
TTATCCTTGTAGCTGTGGCTATGGCTATTCTTAAGTACTTCATTTTTCAGAAAAAGGCTCAACCTTTTTATAAGCAGTCT
GGACTGAATTGGACTGAGGCTATTGCAGCGGAAAATAAGCGTCAACAATCGATTCTGAAGTTCTTTTCACTCTTTACCAA
TGTTAAGGGGATTACGTCGAGTGTTAAACGCCGTGCCTATTTGGATGGTATTCTAAAACGTACAAAGAAAGACAAGGAAC
ATACTTGGTACAATCTTTACCTAAGAGCCTTCTTGCGTTCTGGAGATTACTTTGCCCTTAGCTTACGCCTGTTTGCCCTA
ACGCTTTTAGTTATCTTTTTGGTTCCTGAAAAATGGCTGGCTATGGTGCTTGTGGTTGTTTTTGACTACCTCTTGCTCTT
CCAGCTCACGGCACTTAAATCGCACTTTGCTTATCAGAGAATGGCTAACCTTATGCCAGTTGGAAAAGACATGCAGGTGA
GCAATCTTAAGCGCTTGATTAGCCAGATTGTACTTGTGCTGACTCTGGTACAGGCTGTTTGTCTCTTCGACCTTAAGTTT
AGTCTGATTTTGGTTGGAATGATGCTAGTTCTGAGCCTTGTTTACCTACCAGCCAAGCTTAAGAAGATGATTGACTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A7L6WLD0

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus salivarius strain HSISS4

96.221

99.71

0.959

  pptB Streptococcus thermophilus LMD-9

91.86

99.71

0.916