Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   HRE60_RS07645 Genome accession   NZ_CP054153
Coordinates   1717889..1718620 (-) Length   243 a.a.
NCBI ID   WP_181670646.1    Uniprot ID   A0A7L6WNS1
Organism   Streptococcus salivarius strain DB-B5     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1712889..1723620
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HRE60_RS07620 (HRE60_07620) - 1713957..1715138 (+) 1182 WP_181670644.1 NAD(P)/FAD-dependent oxidoreductase -
  HRE60_RS07630 (HRE60_07630) trmB 1715355..1715996 (-) 642 WP_151404302.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  HRE60_RS07635 (HRE60_07635) - 1716006..1716797 (-) 792 WP_002884270.1 phosphotransferase family protein -
  HRE60_RS07640 (HRE60_07640) pptB 1716855..1717892 (-) 1038 WP_181670645.1 ABC transporter permease Regulator
  HRE60_RS07645 (HRE60_07645) pptA 1717889..1718620 (-) 732 WP_181670646.1 ABC transporter ATP-binding protein Regulator
  HRE60_RS07650 (HRE60_07650) - 1718685..1719104 (+) 420 WP_181670647.1 HIT family protein -
  HRE60_RS07655 (HRE60_07655) - 1719101..1719400 (+) 300 WP_084871000.1 hypothetical protein -
  HRE60_RS07660 (HRE60_07660) - 1719487..1719942 (-) 456 WP_238799460.1 glutaredoxin domain-containing protein -
  HRE60_RS07665 (HRE60_07665) - 1719932..1720372 (-) 441 WP_238799464.1 excalibur calcium-binding domain-containing protein -
  HRE60_RS07670 (HRE60_07670) - 1720845..1722950 (-) 2106 WP_181670650.1 ATP-dependent Clp protease ATP-binding subunit -

Sequence

Protein


Download         Length: 243 a.a.        Molecular weight: 26945.22 Da        Isoelectric Point: 4.5470

>NTDB_id=451184 HRE60_RS07645 WP_181670646.1 1717889..1718620(-) (pptA) [Streptococcus salivarius strain DB-B5]
MLKLEKVTGGYANIPVLKDVTFEVADGELVGLIGLNGAGKSTTINEIIGLLTPYRGQIAIDGLTIQQDSASYRQKIGYIP
ETPSLYEELTLREHLETVLMAYGLDVTEGMARADKYLKLFRLDEKLDWFPTQFSKGMKQKVMIICAFIVNPSLFIVDEPF
LGLDPLAISDLIELLAEEKAKGKAILMSTHVLDSAEKMCDRFVILHHGQVLAQGTLEELRQTFGDDSASLNDIYMQLTKG
ELS

Nucleotide


Download         Length: 732 bp        

>NTDB_id=451184 HRE60_RS07645 WP_181670646.1 1717889..1718620(-) (pptA) [Streptococcus salivarius strain DB-B5]
ATGCTTAAATTAGAAAAGGTGACGGGTGGTTACGCTAATATTCCCGTCCTAAAAGATGTGACCTTTGAGGTGGCTGATGG
CGAATTGGTTGGTCTCATCGGTCTTAATGGTGCTGGAAAATCAACAACAATTAACGAGATTATTGGTCTCTTAACACCTT
ATAGGGGACAGATTGCCATTGATGGGTTAACCATTCAGCAAGATTCAGCTAGCTATCGTCAGAAGATTGGTTACATCCCT
GAAACCCCAAGCCTCTATGAAGAATTGACGCTTCGTGAACATTTGGAAACGGTGTTGATGGCCTATGGTCTTGATGTGAC
TGAGGGGATGGCACGTGCGGACAAGTACCTTAAGCTCTTTCGTTTAGATGAAAAGCTAGATTGGTTCCCGACTCAGTTTT
CAAAGGGGATGAAGCAGAAGGTCATGATTATCTGTGCCTTTATTGTGAATCCAAGTCTTTTCATTGTTGATGAACCCTTC
TTGGGCTTGGACCCCTTGGCAATCTCAGACTTAATTGAGCTTTTGGCTGAGGAAAAAGCTAAGGGCAAGGCAATTCTCAT
GTCTACACACGTTTTGGATTCGGCTGAGAAGATGTGCGACCGCTTCGTGATTTTGCACCATGGACAGGTCTTGGCACAGG
GAACTCTTGAGGAGCTCCGTCAGACTTTTGGCGATGACAGTGCTAGTCTTAACGATATCTACATGCAGTTAACTAAGGGA
GAATTGTCATGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7L6WNS1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

98.765

100

0.988
  pptA Streptococcus thermophilus LMD-9

96.708

100

0.967