Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   HRE60_RS04355 Genome accession   NZ_CP054153
Coordinates   893267..894079 (+) Length   270 a.a.
NCBI ID   WP_048675076.1    Uniprot ID   A0A7L6WJW8
Organism   Streptococcus salivarius strain DB-B5     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 888267..899079
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HRE60_RS04330 (HRE60_04330) - 888609..889307 (-) 699 WP_002886251.1 amino acid ABC transporter permease -
  HRE60_RS04335 (HRE60_04335) - 889325..890158 (-) 834 WP_181671216.1 transporter substrate-binding domain-containing protein -
  HRE60_RS04340 (HRE60_04340) - 890168..890935 (-) 768 WP_181671217.1 amino acid ABC transporter ATP-binding protein -
  HRE60_RS04345 (HRE60_04345) vicR 891221..891928 (+) 708 WP_002884978.1 response regulator YycF Regulator
  HRE60_RS04350 (HRE60_04350) vicK 891921..893264 (+) 1344 WP_118189480.1 cell wall metabolism sensor histidine kinase VicK Regulator
  HRE60_RS04355 (HRE60_04355) vicX 893267..894079 (+) 813 WP_048675076.1 MBL fold metallo-hydrolase Regulator
  HRE60_RS04360 (HRE60_04360) - 894138..894497 (+) 360 WP_002885010.1 YbaN family protein -
  HRE60_RS04365 (HRE60_04365) - 894549..895763 (-) 1215 WP_181671218.1 aminoacyltransferase -
  HRE60_RS04370 (HRE60_04370) yidA 895765..896574 (-) 810 WP_181671219.1 sugar-phosphatase -
  HRE60_RS04375 (HRE60_04375) - 896752..897618 (+) 867 WP_181671220.1 GNAT family N-acetyltransferase -
  HRE60_RS04380 (HRE60_04380) - 897701..898087 (+) 387 WP_048790817.1 DUF1934 domain-containing protein -

Sequence

Protein


Download         Length: 270 a.a.        Molecular weight: 30122.99 Da        Isoelectric Point: 5.3536

>NTDB_id=451167 HRE60_RS04355 WP_048675076.1 893267..894079(+) (vicX) [Streptococcus salivarius strain DB-B5]
MTSDLGFKYSILASGSTGNSFYLETPEKKILVDAGLSGKKITSLLAEIDREPSDLDAILVTHEHKDHIHGVGVLARKYGM
DIYANEKTWQIMDSKNMLGKIDNSQKHVFSRDKLLTFGDIDIESFGVSHDAIDPQFYRFMKDGKSFVMLTDTGYVSDRMA
GIIENADGYLIESNHDVEILRAGSYPWSTKQRILSDQGHLCNEDGADAMIRTIGNKTKKIYLGHLSKENNIKELAHMTME
NQLARADFGVGTDFKVYDTSPDTATPLTDI

Nucleotide


Download         Length: 813 bp        

>NTDB_id=451167 HRE60_RS04355 WP_048675076.1 893267..894079(+) (vicX) [Streptococcus salivarius strain DB-B5]
ATGACCTCAGATTTAGGGTTTAAATATAGTATTTTGGCTTCAGGGTCAACTGGTAATTCCTTTTACTTGGAAACTCCAGA
GAAGAAGATTCTTGTAGATGCTGGTTTGTCTGGTAAGAAAATCACAAGTTTGCTAGCTGAGATTGATCGTGAACCGAGTG
ATTTGGATGCAATCTTAGTAACGCATGAACACAAGGATCACATCCATGGTGTAGGCGTTTTAGCTCGTAAATATGGCATG
GATATCTACGCAAATGAGAAAACCTGGCAAATTATGGATAGTAAAAATATGCTTGGTAAGATTGATAATAGCCAGAAACA
TGTTTTTTCTCGTGATAAGCTTCTGACCTTTGGAGACATTGATATTGAGTCTTTTGGAGTTAGTCACGATGCTATTGATC
CACAGTTCTATCGCTTTATGAAAGATGGAAAGAGTTTCGTCATGTTGACGGATACGGGTTATGTTTCTGATCGTATGGCA
GGTATTATTGAAAATGCCGATGGCTATCTGATTGAGTCCAATCATGATGTTGAAATCCTTAGAGCAGGTTCATATCCTTG
GTCAACCAAGCAACGTATTCTCTCTGATCAAGGTCACTTGTGTAATGAAGATGGAGCGGATGCTATGATTCGTACCATTG
GTAATAAAACTAAAAAAATCTACTTGGGTCACCTTTCCAAAGAAAATAATATCAAGGAGTTGGCTCACATGACGATGGAA
AATCAGTTGGCACGTGCTGACTTTGGTGTTGGAACTGACTTTAAAGTTTATGATACCTCACCGGACACAGCGACTCCACT
GACAGACATTTAA

Domains

Predicted by InterproScan.

Beta-lactamase superfamily domain (Lactamase_B_2)

(29-214)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7L6WJW8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

77.239

99.259

0.767