Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   I6G22_RS04230 Genome accession   NZ_CP065737
Coordinates   779532..780344 (+) Length   270 a.a.
NCBI ID   WP_003131583.1    Uniprot ID   Q9CIG7
Organism   Lactococcus lactis strain FDAARGOS_865     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 774532..785344
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6G22_RS04205 (I6G22_04210) yaaT 774587..775369 (-) 783 WP_025016551.1 stage 0 sporulation family protein Regulator
  I6G22_RS04210 (I6G22_04215) - 775421..776281 (-) 861 WP_012897231.1 DNA polymerase III subunit delta' -
  I6G22_RS04215 (I6G22_04220) tmk 776414..777049 (-) 636 WP_012897230.1 dTMP kinase -
  I6G22_RS04220 (I6G22_04225) yycF 777227..777928 (+) 702 WP_003131580.1 response regulator YycF -
  I6G22_RS04225 (I6G22_04230) vicK 777921..779363 (+) 1443 WP_012897229.1 sensor histidine kinase Regulator
  I6G22_RS04230 (I6G22_04235) vicX 779532..780344 (+) 813 WP_003131583.1 MBL fold metallo-hydrolase Regulator
  I6G22_RS04235 (I6G22_04240) groL 780390..782018 (-) 1629 WP_023188993.1 chaperonin GroEL -
  I6G22_RS04240 (I6G22_04245) groES 782107..782391 (-) 285 WP_003131589.1 co-chaperone GroES -
  I6G22_RS04245 (I6G22_04250) - 782511..782900 (-) 390 WP_023188994.1 single-stranded DNA-binding protein -
  I6G22_RS04250 (I6G22_04255) nox 782990..784330 (-) 1341 WP_023188995.1 H2O-forming NADH oxidase -
  I6G22_RS04255 (I6G22_04260) ytpR 784492..785118 (-) 627 WP_003131594.1 YtpR family tRNA-binding protein -

Sequence

Protein


Download         Length: 270 a.a.        Molecular weight: 30522.37 Da        Isoelectric Point: 5.8494

>NTDB_id=451004 I6G22_RS04230 WP_003131583.1 779532..780344(+) (vicX) [Lactococcus lactis strain FDAARGOS_865]
MTEQNGFKYSILASGSTGNSFYLETPKKKILVDAGLSGKKIESLLSEIDRDIHDIDALLITHEHSDHIKGIGVLARKYGI
DLYANEDTWSELDSKNALGKIPVEQKHLFEMGKTMTFGDIDIESFGVSHDAIAPQFYRFMKDNKSFVMLTDTGYVSDRMR
GTIENADAYLMESNHDIEILRMGAYPWRTKQRILSDQGHLSNEDGAEAAFSIHGNKTKRIFLGHLSLNNNIKELAHLTMD
GYLQQHDVDTKKDLKILDTSHEHASQLYDI

Nucleotide


Download         Length: 813 bp        

>NTDB_id=451004 I6G22_RS04230 WP_003131583.1 779532..780344(+) (vicX) [Lactococcus lactis strain FDAARGOS_865]
ATGACTGAACAAAATGGCTTTAAATATTCCATTTTAGCCTCTGGTTCAACAGGAAATTCTTTTTACTTAGAAACTCCAAA
GAAAAAAATTCTTGTTGATGCCGGACTATCTGGAAAAAAAATAGAAAGTTTACTATCAGAAATTGACCGTGACATTCATG
ATATTGATGCTTTATTAATTACCCATGAACATAGTGACCATATCAAAGGGATTGGTGTTTTGGCAAGAAAATATGGTATT
GACCTTTACGCAAATGAAGATACTTGGTCTGAACTAGATAGTAAAAATGCTTTAGGAAAAATCCCTGTTGAACAAAAACA
TCTGTTTGAAATGGGAAAAACAATGACTTTTGGTGATATTGATATTGAATCTTTCGGCGTGAGTCACGATGCTATCGCAC
CACAGTTTTATCGTTTCATGAAAGATAACAAAAGTTTTGTTATGCTAACTGATACAGGTTATGTATCCGATAGAATGCGT
GGAACCATTGAAAATGCAGATGCTTATCTTATGGAATCAAACCATGACATTGAGATACTCCGCATGGGAGCCTATCCTTG
GCGGACAAAGCAACGTATCCTAAGTGACCAAGGCCACTTATCTAATGAGGACGGCGCTGAGGCTGCTTTTAGTATTCATG
GTAATAAGACAAAACGAATTTTTCTAGGGCACTTGAGTTTAAATAATAATATCAAAGAACTTGCTCATCTTACTATGGAT
GGTTACTTACAGCAACATGATGTCGATACCAAAAAGGACTTGAAGATCCTTGATACTAGTCACGAACATGCTAGTCAACT
TTACGATATTTAG

Domains

Predicted by InterProScan.

Beta-lactamase superfamily domain (Lactamase_B_2)

(29-222)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q9CIG7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

68.519

100

0.685