Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   I6G22_RS04205 Genome accession   NZ_CP065737
Coordinates   774587..775369 (-) Length   260 a.a.
NCBI ID   WP_025016551.1    Uniprot ID   -
Organism   Lactococcus lactis strain FDAARGOS_865     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 769587..780369
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6G22_RS04175 (I6G22_04180) - 769892..770881 (-) 990 WP_021721904.1 mevalonate kinase -
  I6G22_RS04180 (I6G22_04185) mvaD 770868..771824 (-) 957 WP_023188990.1 diphosphomevalonate decarboxylase -
  I6G22_RS04185 (I6G22_04190) mvk 772129..773061 (+) 933 WP_003131564.1 mevalonate kinase -
  I6G22_RS04190 (I6G22_04195) - 773125..773316 (+) 192 WP_012897234.1 hypothetical protein -
  I6G22_RS04195 (I6G22_04200) rsmI 773393..774268 (-) 876 WP_003131568.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  I6G22_RS04200 (I6G22_04205) yabA 774268..774594 (-) 327 WP_011675472.1 DNA replication initiation control protein YabA -
  I6G22_RS04205 (I6G22_04210) yaaT 774587..775369 (-) 783 WP_025016551.1 stage 0 sporulation family protein Regulator
  I6G22_RS04210 (I6G22_04215) - 775421..776281 (-) 861 WP_012897231.1 DNA polymerase III subunit delta' -
  I6G22_RS04215 (I6G22_04220) tmk 776414..777049 (-) 636 WP_012897230.1 dTMP kinase -
  I6G22_RS04220 (I6G22_04225) yycF 777227..777928 (+) 702 WP_003131580.1 response regulator YycF -
  I6G22_RS04225 (I6G22_04230) vicK 777921..779363 (+) 1443 WP_012897229.1 sensor histidine kinase Regulator
  I6G22_RS04230 (I6G22_04235) vicX 779532..780344 (+) 813 WP_003131583.1 MBL fold metallo-hydrolase Regulator

Sequence

Protein


Download         Length: 260 a.a.        Molecular weight: 29831.32 Da        Isoelectric Point: 6.0566

>NTDB_id=451001 I6G22_RS04205 WP_025016551.1 774587..775369(-) (yaaT) [Lactococcus lactis strain FDAARGOS_865]
MIYEIKFAHGESNVFAISDIELAPQTEVILRSDKGNFYGKIVREISEEANLEIHHTIVREVNEDDLQVIAKLEERSKQAK
DKVRQLIIEQGLEMKIIDVAYNFDQMQLFISFTAENRVDFRLLLRELATTFRIRIELRQIGPRDAAKIHGGLGPCGRPLC
CSEFVYEFPNVSIKMAKNQNLSLKQNKLNGLCGRLMCCLTYEDSFYKEAQQLFPDFGEFLTTSEGKGKVVGLNVLKNRVK
IRFGEYSKDFELAEIEVNHG

Nucleotide


Download         Length: 783 bp        

>NTDB_id=451001 I6G22_RS04205 WP_025016551.1 774587..775369(-) (yaaT) [Lactococcus lactis strain FDAARGOS_865]
ATGATTTATGAAATAAAATTTGCACATGGCGAATCAAATGTATTTGCAATAAGTGATATAGAACTTGCTCCACAAACAGA
AGTTATCCTTCGTTCAGATAAGGGAAACTTTTACGGAAAAATTGTACGTGAAATTTCTGAAGAAGCTAATCTTGAAATTC
ACCACACGATTGTGCGTGAAGTAAATGAGGATGATCTCCAAGTTATTGCAAAACTTGAAGAACGTTCTAAACAAGCCAAA
GATAAAGTTCGCCAACTTATCATCGAACAAGGTTTGGAAATGAAAATTATTGATGTTGCTTATAATTTCGACCAAATGCA
ACTTTTTATTTCGTTTACAGCAGAGAATCGTGTTGATTTTCGATTGCTTTTGCGTGAGTTGGCAACAACTTTTAGAATTA
GGATTGAACTTCGCCAAATTGGGCCAAGAGATGCGGCTAAAATTCATGGTGGACTTGGACCTTGTGGACGTCCTTTGTGC
TGTTCTGAGTTTGTTTATGAATTTCCAAATGTTTCAATCAAAATGGCCAAAAATCAAAATCTATCTTTGAAACAAAATAA
ATTGAACGGTCTTTGCGGTCGTTTGATGTGCTGTTTAACTTATGAAGATAGTTTTTATAAAGAAGCCCAACAACTTTTCC
CAGATTTTGGTGAGTTTTTAACTACCTCAGAAGGAAAAGGAAAAGTTGTTGGCTTAAATGTTTTAAAAAATAGAGTAAAA
ATCCGCTTTGGAGAATATAGCAAGGATTTTGAACTTGCAGAAATTGAGGTGAATCATGGCTGA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(56-140)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

45.662

84.231

0.385