Detailed information NTG0451001

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: HRJ37_RS12840
• Genome accession: NZ_CP054136
• Coordinates: 2475096..2477480 (-)
• Length: 794 a.a.
• NCBI ID: WP_045034107.1
• Uniprot ID: -
• Organism: Bacillus altitudinis strain 11-1-1
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2470096..2482480

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HRJ37_RS12805 (HRJ37_12805)	-	2471199..2471927 (+)	729	WP_007501456.1	amino acid ABC transporter ATP-binding protein	-
HRJ37_RS12810 (HRJ37_12810)	-	2471942..2472751 (+)	810	WP_113767040.1	transporter substrate-binding domain-containing protein	-
HRJ37_RS12815 (HRJ37_12815)	-	2472832..2473485 (+)	654	WP_073413627.1	amino acid ABC transporter permease	-
HRJ37_RS12820 (HRJ37_12820)	-	2473501..2474151 (+)	651	WP_008342693.1	amino acid ABC transporter permease	-
HRJ37_RS12825 (HRJ37_12825)	-	2474190..2474321 (-)	132	WP_008342695.1	YrzQ family protein	-
HRJ37_RS12830 (HRJ37_12830)	-	2474342..2474533 (-)	192	WP_003216308.1	hypothetical protein	-
HRJ37_RS12835 (HRJ37_12835)	-	2474547..2475005 (-)	459	WP_041506817.1	PRC-barrel domain-containing protein	-
HRJ37_RS12840 (HRJ37_12840)	recD2	2475096..2477480 (-)	2385	WP_045034107.1	ATP-dependent RecD-like DNA helicase	Machinery gene
HRJ37_RS12845 (HRJ37_12845)	-	2477500..2478153 (-)	654	WP_045034108.1	tetratricopeptide repeat protein	-
HRJ37_RS12850 (HRJ37_12850)	mnmA	2478215..2479333 (-)	1119	WP_008342709.1	tRNA 2-thiouridine(34) synthase MnmA	-
HRJ37_RS12855 (HRJ37_12855)	-	2479429..2480571 (-)	1143	WP_041506813.1	cysteine desulfurase family protein	-
HRJ37_RS12860 (HRJ37_12860)	cymR	2480590..2481009 (-)	420	WP_008342713.1	cysteine metabolism transcriptional regulator CymR	-

Sequence

Protein

• Length: 794 a.a.
• Molecular weight: 88945.33 Da
• Isoelectric Point: 5.0173

>NTDB_id=451001 HRJ37_RS12840 WP_045034107.1 2475096..2477480(-) (recD2) [Bacillus altitudinis strain 11-1-1]
MQEHPDQMKLEDEPFLKGTVQAVIFHNESNLYSVLKVKVIETSENLEEKTASVTGYFPALHEEETYTFYGKVTSHPKFGE
QFQATHFQKEVPTTKQGIIHYLSSDLFEGIGKKTAEEIVGKLGNQTLHQIMRDPSVLYDVPRLSKKKADKLAAALQEHQG
LEQIMISLNQYGFGPQLSMKIYQVYESETLQKIEENPYQLVKDVEGIGFIKADELGARTGISGNDPDRIRAALLYTVETA
SLQDGHTYIQTKDLIVETRKLLNQTGNDYKVTEMDVANQIIALGEGKDMIIEDERCYHPSLFYAEQSVAKRIQKIVAQTE
YADQFPESEFLLALGELEERLGVQYAPTQKEAIQKALMSPMLLLTGGPGTGKTTVIKGIVELYSDLHGVSLDPGDYKKDE
AFPFVLAAPTGRAAKRMTESTGLPAVTIHRLLGWNGSEGFSHDEDQPIEGKLVIIDESSMLDIWLANHLFKAIPDHIQVI
MVGDEHQLPSVGPGQVLRDLLASQAVPAVTLTDIYRQADGSTIVELAHDMKNGVLPKDITARSKDRSFIQCSSDQMKEVI
EKVVSNAAQKGYSAKDIQVLAPMYKGKAGINELNKMLQQILNPKKPKGREIPFGDVVYRTGDKVLQLVNQPENNIFNGDI
GEIVSIFYAKENTEKEDMAVISFDGNEITFTKKDFHQFTHAYCCSIHKSQGSEFPIVVLPVVRSYYRMLRRNLLYTAITR
SKKFLILCGEESALEWGVKNNEDSLRQTSLTMRLTETEEIMDAELAALQKELPFSVHDANIGMEGITPFDFMQE

Nucleotide

• Length: 2385 bp

>NTDB_id=451001 HRJ37_RS12840 WP_045034107.1 2475096..2477480(-) (recD2) [Bacillus altitudinis strain 11-1-1]
GTGCAGGAACATCCAGATCAAATGAAGCTTGAAGATGAACCGTTTTTAAAAGGGACGGTTCAAGCCGTTATTTTCCATAA
CGAAAGTAATTTATACTCGGTGTTAAAAGTAAAAGTCATTGAAACATCAGAGAATTTAGAGGAAAAGACAGCATCTGTCA
CAGGGTACTTCCCAGCGCTTCATGAGGAGGAAACCTACACCTTCTATGGCAAGGTCACAAGTCATCCGAAGTTTGGCGAG
CAGTTTCAAGCCACTCATTTTCAAAAGGAAGTCCCTACAACAAAGCAAGGCATCATTCATTATCTCTCTAGTGACTTGTT
TGAAGGGATTGGAAAAAAGACGGCGGAAGAAATCGTCGGCAAGCTTGGCAATCAGACGCTTCATCAAATTATGCGTGATC
CGTCTGTGTTGTATGACGTCCCTCGCCTGTCAAAAAAGAAGGCAGATAAGCTGGCTGCCGCACTTCAGGAGCATCAGGGG
CTTGAGCAAATCATGATTAGCCTGAATCAATATGGTTTTGGTCCTCAGCTTAGCATGAAGATTTACCAAGTGTACGAGAG
TGAAACGTTGCAGAAAATTGAAGAAAACCCTTATCAGCTCGTCAAAGACGTAGAGGGGATTGGCTTTATTAAAGCAGATG
AACTCGGCGCTAGAACAGGGATATCTGGAAATGATCCAGACCGCATTCGTGCAGCCCTTTTGTATACCGTTGAGACAGCA
AGCCTGCAGGACGGTCATACATACATACAAACGAAAGATCTGATTGTCGAGACCCGTAAACTACTGAATCAAACAGGCAA
TGACTACAAAGTGACTGAAATGGACGTTGCCAATCAGATCATTGCACTTGGTGAAGGGAAAGACATGATTATTGAAGATG
AGCGCTGTTATCATCCGTCGCTCTTTTATGCGGAGCAAAGTGTGGCAAAACGCATTCAAAAAATTGTCGCTCAAACGGAA
TATGCAGATCAATTTCCTGAATCAGAATTTCTGCTTGCACTCGGTGAACTGGAGGAACGGCTTGGTGTCCAGTATGCACC
AACCCAAAAAGAAGCCATTCAAAAGGCACTCATGTCTCCAATGCTGCTTTTAACAGGCGGACCGGGTACAGGGAAAACGA
CGGTCATTAAAGGGATTGTCGAGCTTTACAGCGATCTTCACGGCGTATCTCTTGACCCGGGTGATTATAAAAAAGATGAA
GCATTTCCGTTCGTGCTTGCCGCACCAACTGGACGTGCTGCGAAACGAATGACAGAATCCACTGGACTTCCTGCTGTGAC
CATTCACCGGCTGCTAGGCTGGAATGGATCAGAAGGCTTCTCACATGATGAAGACCAGCCGATTGAAGGGAAGCTTGTCA
TCATTGATGAATCGAGTATGCTGGATATTTGGCTTGCGAACCATTTGTTTAAGGCGATCCCAGATCATATTCAAGTCATT
ATGGTTGGAGACGAACATCAACTTCCATCTGTCGGACCTGGTCAAGTGTTAAGAGACCTGCTTGCGTCACAAGCTGTACC
GGCAGTTACACTAACTGATATTTACCGGCAGGCAGACGGTTCAACAATTGTTGAGCTTGCGCATGATATGAAAAATGGTG
TATTGCCAAAGGATATTACTGCACGCTCGAAGGATCGATCCTTTATTCAATGCTCTAGTGACCAAATGAAAGAAGTTATC
GAGAAAGTGGTCAGCAATGCTGCGCAAAAGGGTTATTCAGCAAAGGACATTCAAGTGCTTGCCCCGATGTATAAAGGAAA
AGCAGGCATTAATGAACTGAATAAAATGCTTCAGCAAATTTTGAATCCTAAAAAGCCAAAAGGAAGAGAAATTCCTTTTG
GTGATGTCGTCTACCGGACAGGTGATAAGGTACTTCAGCTTGTCAATCAGCCGGAGAATAACATTTTTAATGGAGATATT
GGCGAAATTGTCTCGATCTTTTATGCGAAAGAAAACACGGAAAAAGAAGATATGGCGGTCATCTCCTTTGATGGAAACGA
AATCACGTTTACGAAAAAAGATTTTCATCAATTTACACACGCTTATTGTTGCTCGATTCATAAATCCCAGGGCAGTGAAT
TCCCAATCGTGGTGCTGCCAGTCGTGAGAAGTTATTATCGAATGCTTCGAAGAAATTTGCTCTACACGGCCATTACACGA
AGTAAAAAGTTTTTAATTTTGTGCGGTGAGGAATCAGCATTAGAGTGGGGCGTGAAAAATAATGAAGACTCCCTCAGACA
AACGTCTTTAACCATGCGTCTTACTGAAACGGAAGAAATCATGGACGCTGAGCTAGCAGCTCTCCAAAAAGAACTTCCTT
TCAGCGTACATGATGCCAATATTGGCATGGAGGGAATCACCCCGTTTGATTTTATGCAAGAGTAA

Domains

Predicted by InterproScan.

• UvrD-like helicase C-terminal domain (UvrD_C_2) (680-728)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (593-659)

• Helix-hairpin-helix containing domain (HHH_RecD2) (157-248)

• AAA domain (AAA_30) (345-553)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	79.874	100	0.8