Detailed information    

insolico Bioinformatically predicted

Overview

Name   med   Type   Regulator
Locus tag   HRJ37_RS05930 Genome accession   NZ_CP054136
Coordinates   1167010..1167975 (+) Length   321 a.a.
NCBI ID   WP_056407964.1    Uniprot ID   -
Organism   Bacillus altitudinis strain 11-1-1     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1162010..1172975
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HRJ37_RS05900 (HRJ37_05900) argF 1162333..1163283 (+) 951 WP_047945536.1 ornithine carbamoyltransferase -
  HRJ37_RS05905 (HRJ37_05905) - 1163387..1163566 (+) 180 WP_008348517.1 YjzC family protein -
  HRJ37_RS05910 (HRJ37_05910) - 1163736..1165001 (+) 1266 WP_007499050.1 MFS transporter -
  HRJ37_RS05915 (HRJ37_05915) - 1165121..1165315 (-) 195 WP_024720055.1 YjzD family protein -
  HRJ37_RS05920 (HRJ37_05920) - 1165528..1166268 (+) 741 WP_007499048.1 hypothetical protein -
  HRJ37_RS05925 (HRJ37_05925) - 1166344..1166919 (+) 576 WP_039167361.1 hypothetical protein -
  HRJ37_RS05930 (HRJ37_05930) med 1167010..1167975 (+) 966 WP_056407964.1 BMP family ABC transporter substrate-binding protein Regulator
  HRJ37_RS05935 (HRJ37_05935) comZ 1167987..1168184 (+) 198 WP_008348507.1 ComZ family protein Regulator
  HRJ37_RS05940 (HRJ37_05940) - 1168195..1168428 (-) 234 WP_008348506.1 hypothetical protein -
  HRJ37_RS05945 (HRJ37_05945) - 1168598..1169536 (+) 939 WP_024720058.1 beta-ketoacyl-ACP synthase III -
  HRJ37_RS05950 (HRJ37_05950) fabF 1169558..1170799 (+) 1242 WP_008348501.1 beta-ketoacyl-ACP synthase II -
  HRJ37_RS05955 (HRJ37_05955) - 1170877..1171671 (+) 795 WP_041507466.1 DUF2268 domain-containing protein -
  HRJ37_RS05960 (HRJ37_05960) - 1171842..1172822 (+) 981 WP_056407962.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 321 a.a.        Molecular weight: 35903.96 Da        Isoelectric Point: 6.1733

>NTDB_id=450976 HRJ37_RS05930 WP_056407964.1 1167010..1167975(+) (med) [Bacillus altitudinis strain 11-1-1]
MKYQRLVMIFSFLLLMLSACSQAPLKGHIEKVGLLVPDTINDQVWGTKGYKGLLNIQSTFGVDVYYKEGMVDKEKIVDAI
EEFHKKGVNLIIGHGNEYSEIFNLISEDYPKTQFITVNGGKPQADNVTNVTFKGEAMGFFGGMTAAHMSKTKKIGILATY
DWQSEVDGFIKGAKYQDEHVQVLAEFVENWDDADKAVKLYQKLKKQGVDVVYPAGDGYNIPVIEQIKTDNLSAIGYVTDQ
SNLGSHTVLTSTVQHVDKAYSIIAKKFNEGKLNEQGEYSFDFKEGVIEMGKFSSTIDRAFVKDIEKDIANYKKTGKLPNE
K

Nucleotide


Download         Length: 966 bp        

>NTDB_id=450976 HRJ37_RS05930 WP_056407964.1 1167010..1167975(+) (med) [Bacillus altitudinis strain 11-1-1]
ATGAAGTACCAGCGGCTTGTCATGATCTTTTCGTTCCTTCTTCTTATGCTATCTGCCTGCTCGCAGGCGCCGTTAAAAGG
ACATATTGAGAAGGTGGGTTTACTCGTCCCCGATACGATTAATGATCAAGTTTGGGGAACGAAAGGTTATAAAGGCTTAT
TAAATATCCAATCAACATTTGGTGTAGATGTTTATTATAAGGAAGGGATGGTCGACAAGGAGAAAATCGTTGATGCCATT
GAAGAATTTCATAAAAAAGGAGTCAATTTAATTATTGGCCATGGCAATGAATACAGCGAAATTTTCAACTTGATCAGTGA
AGATTATCCGAAAACACAATTTATCACGGTCAATGGAGGCAAGCCTCAAGCTGATAATGTCACAAACGTCACGTTTAAAG
GAGAAGCAATGGGCTTTTTCGGAGGCATGACAGCAGCACATATGTCCAAAACAAAAAAGATTGGTATTCTGGCTACATAT
GATTGGCAAAGTGAAGTAGACGGTTTTATCAAAGGTGCAAAATATCAGGACGAACATGTGCAAGTCCTAGCGGAATTTGT
CGAAAACTGGGATGATGCTGACAAAGCGGTGAAACTCTATCAAAAATTGAAAAAACAAGGTGTAGATGTTGTGTATCCAG
CAGGTGATGGTTATAATATCCCTGTCATTGAACAAATCAAAACCGACAATTTATCTGCGATCGGATATGTCACTGATCAA
TCCAACCTTGGAAGCCATACGGTGTTAACTAGCACTGTACAGCATGTCGATAAAGCGTACAGTATCATTGCGAAGAAGTT
TAATGAAGGCAAGCTAAATGAACAAGGTGAGTACTCCTTTGACTTTAAAGAAGGAGTGATCGAAATGGGGAAATTTAGCT
CAACCATAGACCGCGCTTTTGTGAAAGACATTGAGAAGGATATTGCGAATTACAAAAAAACAGGCAAATTGCCAAATGAA
AAGTGA

Domains

Predicted by InterproScan.

ABC transporter substrate-binding protein PnrA-like (Bmp)

(29-320)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

64.968

97.819

0.636