Detailed information    

insolico Bioinformatically predicted

Overview


Name   micB   Type   Regulator
Locus tag   I6G43_RS05220 Genome accession   NZ_CP065706
Coordinates   1090755..1092104 (+) Length   449 a.a.
NCBI ID   WP_038806132.1    Uniprot ID   -
Organism   Streptococcus oralis strain FDAARGOS_886     
Function   repress competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 1085755..1097104
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6G43_RS05195 (I6G43_05195) - 1086005..1086823 (+) 819 WP_038806136.1 NAD kinase -
  I6G43_RS05200 (I6G43_05200) - 1086820..1087716 (+) 897 WP_038806135.1 RluA family pseudouridine synthase -
  I6G43_RS05205 (I6G43_05205) pta 1087760..1088734 (+) 975 WP_038806134.1 phosphate acetyltransferase -
  I6G43_RS05210 (I6G43_05210) mutY 1088820..1089998 (+) 1179 WP_038806133.1 A/G-specific adenine glycosylase -
  I6G43_RS05215 (I6G43_05215) yycF 1090055..1090762 (+) 708 WP_000723165.1 response regulator YycF -
  I6G43_RS05220 (I6G43_05220) micB 1090755..1092104 (+) 1350 WP_038806132.1 cell wall metabolism sensor histidine kinase VicK Regulator
  I6G43_RS05225 (I6G43_05225) vicX 1092106..1092915 (+) 810 WP_038806131.1 MBL fold metallo-hydrolase Regulator
  I6G43_RS05230 (I6G43_05230) - 1092953..1093300 (-) 348 WP_038806130.1 thiol reductase thioredoxin -
  I6G43_RS05235 (I6G43_05235) - 1093411..1095129 (-) 1719 WP_038806129.1 phospho-sugar mutase -

Sequence


Protein


Download         Length: 449 a.a.        Molecular weight: 51623.14 Da        Isoelectric Point: 4.6847

>NTDB_id=450734 I6G43_RS05220 WP_038806132.1 1090755..1092104(+) (micB) [Streptococcus oralis strain FDAARGOS_886]
MIEDIRQTILTSDFIFILILLGFILVVTLLLLENRRDNIRLKQVNQKIKDLIAGDYSRVLDMQGSSEITNITNNLNDLSE
VIRLTQENLEQETKRLNSILSYMTDGVLATNRRGQITMINDMAKKQLGVVKEEALNKSILELLKIEDEYELRDLITQIPE
LMIDSQNANGEYLSLRVRFALIRRESGFISGLVAVLHDTTEQEKEERERRLFVSNVSHELRTPLTSVKSYLEALDEGALY
DPVAPDFIKVSLDETNRMMRMVTDLLHLSRIDNATTQLDVELINFTAFITFILNRFDKMRSQDEEKKYELVRDYPINSVW
IEIDTDKMTQVIDNILNNAIKYSPDGGKITVSMKTTEDQMILSIKDQGLGIPKQDLPKIFDRFYRVDRARSRAQGGTGLG
LAIAKEIIKQHNGFIWAKSEYGKGSTFTIVLPYDKEAVKEEVWEDEVED

Nucleotide


Download         Length: 1350 bp        

>NTDB_id=450734 I6G43_RS05220 WP_038806132.1 1090755..1092104(+) (micB) [Streptococcus oralis strain FDAARGOS_886]
ATGATTGAAGATATTAGACAAACGATTCTGACCAGTGATTTTATCTTTATCCTGATTTTACTTGGCTTTATCTTGGTGGT
AACCTTGTTGTTACTGGAAAATCGTCGGGATAATATTCGTCTAAAGCAGGTTAATCAAAAGATTAAAGATTTGATTGCAG
GGGATTATTCTCGAGTATTGGATATGCAGGGAAGCTCTGAAATCACCAACATCACCAATAATCTTAATGACTTGTCTGAG
GTCATTCGTTTAACGCAGGAGAATTTGGAGCAAGAAACAAAAAGGCTTAACAGTATTCTTTCTTATATGACAGATGGAGT
ACTAGCGACCAATCGCCGTGGTCAAATTACCATGATTAACGATATGGCCAAGAAACAGCTGGGTGTCGTAAAAGAAGAAG
CATTGAACAAAAGCATCCTAGAATTGCTTAAGATAGAGGATGAATATGAACTGCGTGACCTCATTACACAGATTCCTGAA
TTGATGATTGATTCCCAAAATGCTAATGGAGAATATCTTAGTCTTCGTGTGCGTTTTGCACTCATTCGTCGTGAGTCTGG
ATTCATTTCTGGTTTGGTTGCCGTTTTGCACGATACGACTGAACAGGAGAAGGAAGAGCGTGAACGGAGACTCTTCGTGT
CTAATGTTAGCCATGAGTTGCGGACACCTTTGACTAGTGTTAAGTCCTATCTTGAAGCCTTAGACGAGGGAGCCTTGTAT
GATCCTGTTGCTCCTGATTTTATCAAGGTTTCGCTCGATGAAACCAACCGTATGATGCGGATGGTGACAGATCTCTTGCA
TCTCTCTCGTATTGATAATGCGACCACTCAGTTGGATGTGGAATTGATTAATTTTACGGCCTTCATTACCTTTATCCTCA
ACCGCTTTGATAAGATGAGAAGTCAGGATGAGGAGAAAAAATATGAGCTGGTTAGAGATTACCCAATCAACTCAGTTTGG
ATCGAGATTGATACCGATAAAATGACTCAGGTGATTGATAATATTCTTAACAATGCCATCAAGTACTCACCAGATGGTGG
GAAAATTACTGTCAGCATGAAAACCACTGAAGACCAGATGATTTTATCTATCAAAGACCAAGGTCTAGGTATTCCAAAAC
AAGATTTGCCGAAGATTTTTGACCGCTTTTACCGTGTGGATCGTGCAAGAAGTCGTGCTCAAGGTGGAACTGGTCTAGGT
CTGGCTATTGCCAAGGAAATCATCAAACAACACAATGGCTTTATTTGGGCCAAAAGTGAATACGGTAAGGGGTCAACCTT
TACCATTGTGCTCCCTTATGATAAGGAGGCAGTGAAAGAAGAAGTCTGGGAGGATGAAGTAGAAGACTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  micB Streptococcus pneumoniae Cp1015

89.066

97.773

0.871

  vicK Streptococcus mutans UA159

70.398

89.532

0.63