Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   I6G43_RS05225 Genome accession   NZ_CP065706
Coordinates   1092106..1092915 (+) Length   269 a.a.
NCBI ID   WP_038806131.1    Uniprot ID   -
Organism   Streptococcus oralis strain FDAARGOS_886     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1087106..1097915
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6G43_RS05205 (I6G43_05205) pta 1087760..1088734 (+) 975 WP_038806134.1 phosphate acetyltransferase -
  I6G43_RS05210 (I6G43_05210) mutY 1088820..1089998 (+) 1179 WP_038806133.1 A/G-specific adenine glycosylase -
  I6G43_RS05215 (I6G43_05215) yycF 1090055..1090762 (+) 708 WP_000723165.1 response regulator YycF -
  I6G43_RS05220 (I6G43_05220) micB 1090755..1092104 (+) 1350 WP_038806132.1 cell wall metabolism sensor histidine kinase VicK Regulator
  I6G43_RS05225 (I6G43_05225) vicX 1092106..1092915 (+) 810 WP_038806131.1 MBL fold metallo-hydrolase Regulator
  I6G43_RS05230 (I6G43_05230) - 1092953..1093300 (-) 348 WP_038806130.1 thiol reductase thioredoxin -
  I6G43_RS05235 (I6G43_05235) - 1093411..1095129 (-) 1719 WP_038806129.1 phospho-sugar mutase -
  I6G43_RS05240 (I6G43_05240) - 1095284..1097185 (+) 1902 WP_000584899.1 ABC-F family ATP-binding cassette domain-containing protein -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 29890.89 Da        Isoelectric Point: 6.1738

>NTDB_id=450735 I6G43_RS05225 WP_038806131.1 1092106..1092915(+) (vicX) [Streptococcus oralis strain FDAARGOS_886]
MSEIGFKYSILASGSSGNSFYLETPKKKILVDAGLSGKKITSLLAEINRKPEDLDAILITHEHSDHIHGVGVLARKYGMD
LYANEKTWQAMENSKYLGKVDSSQKHIFEMGKTKTFGDIDIESFGVSHDAAAPQFYRFMKDDKSFVMLTDTGYVSDRMAG
IVENADGYLIESNHDVEILRAGSYAWRLKQRILSDLGHLSNEDGAEAMIRAMGNRTKKIYLGHLSKENNIKELAHMTMVN
QLAQADLGVGVDFKVYDTSPDTATPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=450735 I6G43_RS05225 WP_038806131.1 1092106..1092915(+) (vicX) [Streptococcus oralis strain FDAARGOS_886]
ATGAGTGAGATAGGCTTTAAATACAGTATTTTAGCATCAGGTTCCAGTGGAAATTCCTTTTATCTGGAAACGCCAAAAAA
GAAAATCTTAGTGGATGCAGGCTTGTCTGGTAAGAAAATTACCAGCCTGCTAGCTGAAATCAATCGCAAGCCTGAAGATT
TGGATGCGATTTTGATTACGCATGAGCATTCAGACCATATTCATGGAGTCGGTGTCTTGGCTCGAAAGTATGGTATGGAT
CTTTACGCCAATGAAAAAACTTGGCAGGCTATGGAAAATAGCAAGTACCTCGGTAAGGTTGATTCATCCCAGAAGCACAT
TTTTGAAATGGGTAAAACCAAAACCTTTGGCGATATCGACATTGAGAGTTTTGGGGTCAGCCACGATGCGGCAGCACCCC
AGTTTTACCGCTTTATGAAAGACGACAAGAGCTTTGTCATGCTGACCGATACAGGTTATGTTAGTGACCGTATGGCAGGA
ATTGTCGAGAATGCTGACGGTTATCTCATTGAGTCCAACCATGATGTGGAAATCTTGCGAGCAGGTTCTTATGCTTGGCG
ACTCAAACAGCGAATCTTATCTGATCTTGGTCACCTCTCTAACGAAGACGGTGCTGAGGCCATGATTCGTGCAATGGGAA
ATCGGACCAAGAAAATCTACCTTGGACATTTGTCTAAGGAGAACAATATCAAAGAACTGGCTCATATGACCATGGTCAAT
CAGCTAGCCCAAGCTGATTTGGGTGTAGGAGTAGACTTTAAAGTTTACGATACCTCTCCCGATACCGCAACACCACTTAC
AGATATATAA

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

77.695

100

0.777