Detailed information    

insolico Bioinformatically predicted

Overview

Name   htrA   Type   Regulator
Locus tag   FOC63_RS03905 Genome accession   NZ_CP054015
Coordinates   799727..800992 (+) Length   421 a.a.
NCBI ID   WP_013643604.1    Uniprot ID   -
Organism   Streptococcus gallolyticus strain FDAARGOS_755     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 794727..805992
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FOC63_RS03880 (FOC63_03880) - 795690..798284 (+) 2595 WP_009855219.1 YfhO family protein -
  FOC63_RS03900 (FOC63_03900) rlmH 799037..799516 (-) 480 WP_009855220.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  FOC63_RS03905 (FOC63_03905) htrA 799727..800992 (+) 1266 WP_013643604.1 S1C family serine protease Regulator
  FOC63_RS03910 (FOC63_03910) spo0J 801062..801838 (+) 777 WP_009855222.1 ParB/RepB/Spo0J family partition protein Regulator
  FOC63_RS03915 (FOC63_03915) dnaA 802042..803397 (+) 1356 WP_009855223.1 chromosomal replication initiator protein DnaA -
  FOC63_RS03920 (FOC63_03920) dnaN 803555..804691 (+) 1137 WP_009855224.1 DNA polymerase III subunit beta -
  FOC63_RS03925 (FOC63_03925) - 804822..805706 (+) 885 WP_009855225.1 diacylglycerol/lipid kinase family protein -
  FOC63_RS03930 (FOC63_03930) - 805718..805912 (+) 195 WP_009855226.1 DUF951 domain-containing protein -

Sequence

Protein


Download         Length: 421 a.a.        Molecular weight: 43832.63 Da        Isoelectric Point: 4.0940

>NTDB_id=450136 FOC63_RS03905 WP_013643604.1 799727..800992(+) (htrA) [Streptococcus gallolyticus strain FDAARGOS_755]
MKKIKLPKLPKLPKFNYKNWLKPLGVILVGFIAGIAGTILVLNMAGISITNVSGSSTKTTTSSVSYSNSNDTTKAVEKVQ
DAVVSVINYKSDSSSSTSDLYNQMFGNDSDSSSDSSSTDDLTVYSEGSGVIYKKDGDSAYVVTNNHVIDGAEQIEIMLAD
GTKVVGELVGADTYSDIAVVKISSDNVSTVAEFADSDKLTVGETAIAIGSPLGTEYANSVTQGIVSSLSRTVTMTNDDGE
TISTNAIQTDAAINPGNSGGALINIEGQVIGINSSKISSTSSSGESVEGMGFAIPSNDVVSIINQLEENGQVIRPALGIS
MVNLSDLSTNAIAQLNIPTSVTSGVVVAAVQSGMPAEGNLEQYDVITAIDDQEVTSTSDLQSILYTHSVGDSVKVTFYRG
TDKKTATIELTKTTQDLSSSN

Nucleotide


Download         Length: 1266 bp        

>NTDB_id=450136 FOC63_RS03905 WP_013643604.1 799727..800992(+) (htrA) [Streptococcus gallolyticus strain FDAARGOS_755]
GTGAAAAAAATAAAATTACCAAAATTACCCAAGTTGCCAAAATTTAATTACAAAAATTGGTTAAAACCATTGGGTGTCAT
TTTAGTCGGCTTTATAGCTGGTATCGCAGGTACAATACTCGTCCTAAATATGGCAGGTATTTCAATCACTAACGTCAGTG
GTTCAAGTACAAAAACAACAACAAGTAGCGTAAGCTATTCTAACTCTAACGATACAACAAAAGCTGTGGAAAAAGTTCAA
GACGCAGTTGTATCTGTTATTAACTACAAATCAGACTCGTCGTCTTCTACAAGTGACCTCTACAATCAAATGTTTGGCAA
TGATTCAGACAGTAGTAGCGATTCAAGCTCTACGGATGATTTGACCGTTTACAGTGAAGGTTCTGGGGTTATTTACAAAA
AAGATGGTGATTCTGCTTATGTCGTCACTAACAATCACGTTATTGATGGGGCCGAACAAATTGAAATCATGCTTGCTGAT
GGAACAAAAGTTGTTGGTGAGCTAGTCGGAGCAGATACTTATTCAGATATTGCCGTTGTCAAAATTTCTTCTGACAACGT
ATCTACAGTTGCTGAATTTGCCGATTCTGATAAATTAACTGTCGGTGAAACTGCTATCGCTATTGGTAGCCCACTTGGTA
CTGAATATGCTAACTCTGTAACACAAGGTATTGTCTCAAGTCTTAGCCGTACAGTAACTATGACAAATGATGATGGTGAA
ACTATCTCAACAAATGCTATCCAAACGGATGCAGCGATTAACCCAGGTAACTCTGGTGGTGCTTTAATTAACATTGAAGG
ACAAGTTATCGGTATCAATTCAAGTAAGATTTCATCTACATCAAGTTCTGGTGAATCTGTCGAAGGTATGGGATTTGCCA
TTCCATCTAACGATGTTGTATCCATTATTAACCAATTGGAAGAAAATGGGCAAGTTATCCGCCCAGCACTTGGTATTTCA
ATGGTAAACTTGAGCGACCTTTCAACAAATGCAATTGCTCAACTTAACATTCCAACAAGTGTAACAAGCGGTGTCGTTGT
GGCGGCTGTTCAATCTGGTATGCCAGCTGAAGGTAATCTCGAACAATATGATGTCATCACAGCTATTGACGACCAAGAAG
TAACATCTACTTCAGATCTTCAAAGTATCCTTTATACTCATTCTGTTGGTGACTCTGTCAAAGTAACCTTCTACCGTGGA
ACTGATAAGAAAACAGCCACAATTGAATTAACTAAGACAACACAAGATTTATCTTCCTCAAACTGA

Domains

Predicted by InterproScan.

Trypsin-like peptidase domain (Trypsin_2)

(127-272)

PDZ domain (PDZ_2)

(315-410)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mutans UA159

64.444

96.2

0.62
  htrA Streptococcus gordonii str. Challis substr. CH1

59.804

96.912

0.58
  htrA Streptococcus pneumoniae D39

57.908

97.625

0.565
  htrA Streptococcus pneumoniae TIGR4

57.908

97.625

0.565
  htrA Streptococcus mitis NCTC 12261

57.908

97.625

0.565
  htrA Streptococcus pneumoniae R6

57.908

97.625

0.565
  htrA Streptococcus pneumoniae Rx1

57.908

97.625

0.565