Detailed information NTG0450035

Bioinformatically predicted

Overview

• Name: ccpA
• Type: Regulator
• Locus tag: I5367_RS13620
• Genome accession: NZ_CP065539
• Coordinates: 2808456..2809460 (-)
• Length: 334 a.a.
• NCBI ID: WP_012118209.1
• Uniprot ID: A7Z7R8
• Organism: Bacillus amyloliquefaciens strain DGL1
• Function: regulate comCDE transcription and transformation (predicted from homology) Competence regulation

Genomic Context

Location: 2803456..2814460

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I5367_RS13595 (I5367_13595)	-	2804419..2805051 (+)	633	WP_012118205.1	GNAT family N-acetyltransferase	-
I5367_RS13600 (I5367_13600)	-	2805076..2805720 (+)	645	WP_012118206.1	acetoin utilization AcuB family protein	-
I5367_RS13605 (I5367_13605)	-	2805717..2806883 (+)	1167	WP_007408773.1	acetoin utilization protein AcuC	-
I5367_RS13610 (I5367_13610)	motS	2806893..2807582 (-)	690	WP_012118207.1	flagellar motor protein MotS	-
I5367_RS13615 (I5367_13615)	motP	2807572..2808387 (-)	816	WP_012118208.1	flagellar motor protein MotP	-
I5367_RS13620 (I5367_13620)	ccpA	2808456..2809460 (-)	1005	WP_012118209.1	catabolite control protein A	Regulator
I5367_RS13625 (I5367_13625)	-	2809739..2810815 (-)	1077	WP_003152383.1	bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase	-
I5367_RS13630 (I5367_13630)	ytxJ	2811052..2811378 (-)	327	WP_023357089.1	bacillithiol system redox-active protein YtxJ	-
I5367_RS13635 (I5367_13635)	-	2811404..2811817 (-)	414	WP_003152380.1	YtxH domain-containing protein	-
I5367_RS13640 (I5367_13640)	-	2811850..2812272 (-)	423	WP_007408777.1	DUF948 domain-containing protein	-
I5367_RS13645 (I5367_13645)	murC	2812428..2813726 (-)	1299	WP_012118211.1	UDP-N-acetylmuramate--L-alanine ligase	-

Sequence

Protein

• Length: 334 a.a.
• Molecular weight: 36954.28 Da
• Isoelectric Point: 4.8365

>NTDB_id=450035 I5367_RS13620 WP_012118209.1 2808456..2809460(-) (ccpA) [Bacillus amyloliquefaciens strain DGL1]
MSNITIYDVAREANVSMATVSRVVNGNPNVKPTTRKKVLEAIDRLGYRPNAVARGLASKKTTTVGVIIPDISSIFYSELA
RGIEDIATMYKYNIILSNSDQNLEKELHLLNTMLGKQVDGIVFMGGNITDEHVEEFKRSPVPIVLAASVEEQGETPSVAI
DYEQAIYDAVKLFIDKGHRDIAFVSGPMQEPINRSKKLQGYKRALEEAAIPFNEQFVAEGDYTYDSGMEALQSLMGLDRK
PTAILSATDEMALGIIHAAQDQGLSIPDDLDIIGFDNTRLSLMVRPQLSTVVQPTYDIGAVAMRLLTKLMNKEPVEEQIV
ELPHRIELRQSTKS

Nucleotide

• Length: 1005 bp

>NTDB_id=450035 I5367_RS13620 WP_012118209.1 2808456..2809460(-) (ccpA) [Bacillus amyloliquefaciens strain DGL1]
GTGAGCAACATTACGATATACGATGTGGCCAGAGAAGCAAATGTCAGTATGGCGACTGTTTCCCGCGTCGTGAACGGCAA
CCCGAATGTAAAACCGACGACCAGAAAAAAAGTATTGGAAGCCATTGACCGGCTCGGCTATCGCCCGAACGCGGTGGCAA
GAGGGCTTGCAAGCAAAAAAACGACTACGGTCGGCGTCATCATCCCTGATATCTCAAGCATTTTCTACTCTGAACTTGCG
CGTGGAATTGAAGATATCGCGACGATGTACAAATATAATATTATTTTAAGCAACTCGGACCAAAATCTTGAGAAAGAACT
GCATCTGTTAAATACGATGCTCGGCAAACAAGTGGACGGTATCGTATTTATGGGCGGCAACATTACGGACGAGCATGTCG
AAGAATTTAAGCGCTCTCCTGTGCCGATCGTCTTGGCGGCATCAGTGGAAGAACAGGGCGAGACGCCTTCTGTCGCCATT
GATTACGAACAGGCGATTTATGATGCCGTTAAGCTTTTCATTGATAAAGGGCATCGCGATATCGCATTCGTCTCCGGACC
GATGCAAGAGCCGATCAACCGTTCGAAAAAACTGCAAGGGTACAAACGGGCGCTTGAAGAAGCGGCGATTCCGTTTAACG
AGCAATTCGTAGCGGAAGGCGATTACACCTATGATTCCGGTATGGAGGCGCTTCAAAGCTTGATGGGCCTTGACCGGAAA
CCGACGGCGATTCTTTCTGCAACGGATGAAATGGCCCTCGGCATTATCCATGCGGCCCAAGATCAAGGTCTTTCGATACC
TGATGATCTTGATATTATCGGTTTTGACAATACGAGATTGAGCCTGATGGTCCGCCCTCAGCTTTCAACAGTCGTGCAGC
CTACGTACGATATCGGCGCCGTGGCGATGAGACTTTTGACAAAACTGATGAACAAAGAGCCGGTTGAAGAGCAGATCGTC
GAATTGCCTCACCGCATCGAATTAAGACAATCAACCAAGTCATAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (171-332)

• Bacterial regulatory proteins, lacI family (LacI) (5-50)

3D structure

• AlphaFold DB: A7Z7R8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ccpA	Streptococcus pneumoniae D39	54.242	98.802	0.536
ccpA	Streptococcus gordonii str. Challis substr. CH1	53.333	98.802	0.527
ccpA	Lactococcus lactis subsp. lactis strain DGCC12653	50.602	99.401	0.503