Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrR   Type   Regulator
Locus tag   FOC73_RS07420 Genome accession   NZ_CP053998
Coordinates   1519503..1519946 (+) Length   147 a.a.
NCBI ID   WP_002885568.1    Uniprot ID   A0A0A1DW04
Organism   Streptococcus salivarius strain FDAARGOS_771     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1514503..1524946
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FOC73_RS07405 (FOC73_07405) gdhA 1515618..1516970 (+) 1353 WP_002885547.1 NADP-specific glutamate dehydrogenase -
  FOC73_RS07410 (FOC73_07410) - 1517653..1518816 (+) 1164 WP_254388428.1 hypothetical protein -
  FOC73_RS07415 (FOC73_07415) - 1518907..1519317 (+) 411 WP_002885542.1 peptide deformylase -
  FOC73_RS07420 (FOC73_07420) rcrR 1519503..1519946 (+) 444 WP_002885568.1 MarR family transcriptional regulator Regulator
  FOC73_RS07425 (FOC73_07425) rcrP 1519950..1521764 (+) 1815 WP_002885485.1 ABC transporter ATP-binding protein Regulator
  FOC73_RS07430 (FOC73_07430) rcrQ 1521754..1523532 (+) 1779 WP_002885473.1 ABC transporter ATP-binding protein Regulator
  FOC73_RS07435 (FOC73_07435) - 1523640..1524263 (+) 624 WP_002885479.1 GNAT family N-acetyltransferase -

Sequence

Protein


Download         Length: 147 a.a.        Molecular weight: 17181.67 Da        Isoelectric Point: 9.3639

>NTDB_id=449966 FOC73_RS07420 WP_002885568.1 1519503..1519946(+) (rcrR) [Streptococcus salivarius strain FDAARGOS_771]
MHGKDTFSEFREFINTMESRVQELGKVHGVEHLAGPQGFAVKYLSDNQDKEIFIKDIEKRLCISKSVASNLVKRMEKNGF
VELVTSDKDKRYKYVHLTDLGKKKARDVKHFREAIHEQLLEGISKEDAETAFRVFHQIRMNLEKNKE

Nucleotide


Download         Length: 444 bp        

>NTDB_id=449966 FOC73_RS07420 WP_002885568.1 1519503..1519946(+) (rcrR) [Streptococcus salivarius strain FDAARGOS_771]
ATGCATGGAAAAGATACTTTTAGTGAATTCAGAGAATTCATCAATACTATGGAATCTCGAGTGCAAGAGTTAGGAAAGGT
CCATGGGGTTGAGCATTTAGCCGGTCCACAAGGATTTGCTGTCAAGTATTTGTCTGACAATCAAGATAAAGAAATCTTTA
TCAAAGACATTGAAAAAAGACTATGTATTTCTAAATCAGTGGCTAGTAATTTGGTCAAACGAATGGAAAAAAATGGTTTT
GTTGAGTTGGTGACATCGGACAAGGATAAACGCTACAAGTATGTTCATCTGACAGACTTAGGTAAAAAGAAAGCTCGAGA
TGTCAAACATTTTCGAGAGGCCATCCATGAACAGCTGTTAGAAGGTATTTCTAAAGAAGATGCTGAAACAGCCTTTCGTG
TCTTTCACCAAATTCGTATGAATTTAGAAAAAAATAAGGAGTAA

Domains

Predicted by InterproScan.

MarR family (MarR_2)

(37-91)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0A1DW04

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrR Streptococcus mutans UA159

58.156

95.918

0.558