Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   FOC73_RS07425 Genome accession   NZ_CP053998
Coordinates   1519950..1521764 (+) Length   604 a.a.
NCBI ID   WP_002885485.1    Uniprot ID   -
Organism   Streptococcus salivarius strain FDAARGOS_771     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1514950..1526764
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FOC73_RS07405 (FOC73_07405) gdhA 1515618..1516970 (+) 1353 WP_002885547.1 NADP-specific glutamate dehydrogenase -
  FOC73_RS07410 (FOC73_07410) - 1517653..1518816 (+) 1164 WP_254388428.1 hypothetical protein -
  FOC73_RS07415 (FOC73_07415) - 1518907..1519317 (+) 411 WP_002885542.1 peptide deformylase -
  FOC73_RS07420 (FOC73_07420) rcrR 1519503..1519946 (+) 444 WP_002885568.1 MarR family transcriptional regulator Regulator
  FOC73_RS07425 (FOC73_07425) rcrP 1519950..1521764 (+) 1815 WP_002885485.1 ABC transporter ATP-binding protein Regulator
  FOC73_RS07430 (FOC73_07430) rcrQ 1521754..1523532 (+) 1779 WP_002885473.1 ABC transporter ATP-binding protein Regulator
  FOC73_RS07435 (FOC73_07435) - 1523640..1524263 (+) 624 WP_002885479.1 GNAT family N-acetyltransferase -
  FOC73_RS07440 (FOC73_07440) - 1524411..1525034 (+) 624 WP_002885512.1 GTP pyrophosphokinase family protein -
  FOC73_RS07445 (FOC73_07445) - 1525036..1525713 (+) 678 WP_002885520.1 response regulator transcription factor -

Sequence

Protein


Download         Length: 604 a.a.        Molecular weight: 67080.89 Da        Isoelectric Point: 6.5198

>NTDB_id=449967 FOC73_RS07425 WP_002885485.1 1519950..1521764(+) (rcrP) [Streptococcus salivarius strain FDAARGOS_771]
MFKIFKRLTTKELIMIVLAVIFVCLNVYLNLKIPDYMSDITTLLSTKGTKASDIFAWNTDAPGMRMLLMSFAGFMASVVV
GFLAARTAASFTTRLRDDIFHQVLDFSDAEIKKFSIPSLLTRTTNDITQLQMVLTMGLQVITQGPIMAIWAITKIADKNG
NWLLALLVAVAVIAILMLFLLIMVMPKQRLIQTLTDKLNSVTRESLTGIRVVRAYNAESYQEDKFEKANTDLTQNNLFIG
RSFALLIPVMTAVSSGLTLAIYWIGAHLIEDVKIPTDPTKIAGAMENKVHLFSDMVVYSSYAMQVVMGFMMMIVVFFLLP
RAVVAAGRINEVLDTQSSVSYPENSSEKPKEVGTVKFDDVSFRYSETSEPVLEHVSFKAKKGDTVAFIGSTGSGKSTLVN
LIPRFYDATQGTIKVDGIDVRHYDHETLHNIVGYIPQKAVLFSGDITSNMTMGTSNNSPLDDAKIWEALELAQGKDFVEN
KEGQLKAEVAQAGSNFSGGQKQRLAIARALARKPEILIFDDSFSALDYKTDRKLRQELAEKTQEMTKLIVAQRISTIMDA
DQILVLDQGKVVGQGTHKELLANNEVYQEIAYSQLSKEELENGK

Nucleotide


Download         Length: 1815 bp        

>NTDB_id=449967 FOC73_RS07425 WP_002885485.1 1519950..1521764(+) (rcrP) [Streptococcus salivarius strain FDAARGOS_771]
ATGTTTAAAATTTTTAAACGTTTGACGACAAAAGAGTTAATCATGATTGTCTTAGCGGTGATTTTTGTTTGCTTGAACGT
CTATCTAAACTTGAAAATTCCAGACTATATGTCTGATATTACGACACTCTTATCAACTAAGGGAACTAAAGCGTCGGATA
TTTTTGCCTGGAATACAGATGCCCCAGGGATGCGAATGCTTTTAATGTCATTTGCAGGCTTTATGGCCTCTGTAGTGGTT
GGTTTCTTAGCTGCCAGAACAGCGGCAAGTTTTACCACCCGTCTTCGTGATGATATCTTCCATCAGGTTCTAGATTTTTC
GGATGCAGAGATCAAGAAATTCTCAATTCCTAGTCTTTTGACCCGTACGACAAATGATATTACCCAATTGCAGATGGTAC
TTACCATGGGGTTACAGGTTATTACACAGGGGCCTATCATGGCCATTTGGGCGATTACAAAGATTGCCGATAAAAATGGA
AATTGGCTCCTTGCCTTGCTTGTCGCTGTGGCAGTGATTGCCATTCTCATGCTTTTCCTCTTGATTATGGTTATGCCTAA
GCAACGCTTGATTCAAACTCTGACTGATAAACTGAATAGCGTAACGCGTGAATCTCTTACAGGAATTCGTGTGGTGCGTG
CCTATAACGCCGAAAGTTACCAAGAGGATAAATTTGAAAAGGCCAATACTGATTTGACCCAAAACAATCTCTTTATCGGT
CGTTCTTTTGCCTTACTGATACCCGTGATGACTGCTGTATCAAGTGGTTTGACACTGGCTATTTATTGGATTGGTGCGCA
TTTGATTGAAGATGTTAAGATTCCAACAGATCCAACTAAGATTGCTGGTGCCATGGAAAATAAGGTCCATCTCTTCTCAG
ATATGGTGGTTTATTCATCTTATGCCATGCAGGTTGTGATGGGATTCATGATGATGATTGTTGTTTTCTTCCTTCTTCCA
CGTGCAGTTGTAGCAGCTGGTCGTATCAATGAAGTTCTAGATACCCAATCTTCAGTCTCTTATCCTGAAAATAGTTCTGA
AAAACCTAAAGAAGTGGGTACTGTCAAATTTGATGATGTTTCCTTCCGTTATTCTGAAACTTCAGAGCCTGTTTTGGAGC
ATGTTAGCTTCAAAGCTAAAAAAGGTGACACAGTTGCCTTTATTGGTTCGACTGGATCTGGTAAATCAACGCTTGTCAAC
CTTATCCCACGTTTTTATGATGCCACGCAAGGAACAATCAAGGTTGACGGTATCGATGTGCGACATTATGACCATGAAAC
CTTGCACAATATAGTTGGTTATATTCCACAGAAGGCTGTGCTTTTCTCAGGTGATATCACGTCAAATATGACGATGGGAA
CGAGCAATAACAGTCCCCTTGATGATGCTAAGATTTGGGAAGCTCTCGAATTGGCTCAAGGAAAAGACTTTGTTGAAAAT
AAAGAAGGTCAACTTAAAGCAGAAGTTGCCCAAGCTGGGTCTAACTTCTCAGGTGGACAGAAGCAACGTTTGGCTATTGC
GCGTGCCTTGGCACGTAAGCCTGAAATCTTGATTTTCGATGATTCCTTCTCAGCCTTGGATTATAAGACCGATCGTAAGT
TACGTCAAGAATTGGCTGAAAAAACACAAGAGATGACCAAGTTGATTGTTGCTCAACGTATCTCTACTATTATGGATGCG
GACCAAATCTTGGTACTTGACCAAGGTAAGGTCGTTGGTCAAGGAACTCACAAGGAACTCTTGGCAAATAATGAGGTTTA
CCAAGAAATTGCCTATTCACAATTGTCTAAGGAGGAGTTAGAAAATGGAAAATAA

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(17-271)

ABC transporter (ABC_tran)

(372-522)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

68.43

100

0.685