Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   FOC73_RS07430 Genome accession   NZ_CP053998
Coordinates   1521754..1523532 (+) Length   592 a.a.
NCBI ID   WP_002885473.1    Uniprot ID   -
Organism   Streptococcus salivarius strain FDAARGOS_771     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1516754..1528532
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FOC73_RS07410 (FOC73_07410) - 1517653..1518816 (+) 1164 WP_254388428.1 hypothetical protein -
  FOC73_RS07415 (FOC73_07415) - 1518907..1519317 (+) 411 WP_002885542.1 peptide deformylase -
  FOC73_RS07420 (FOC73_07420) rcrR 1519503..1519946 (+) 444 WP_002885568.1 MarR family transcriptional regulator Regulator
  FOC73_RS07425 (FOC73_07425) rcrP 1519950..1521764 (+) 1815 WP_002885485.1 ABC transporter ATP-binding protein Regulator
  FOC73_RS07430 (FOC73_07430) rcrQ 1521754..1523532 (+) 1779 WP_002885473.1 ABC transporter ATP-binding protein Regulator
  FOC73_RS07435 (FOC73_07435) - 1523640..1524263 (+) 624 WP_002885479.1 GNAT family N-acetyltransferase -
  FOC73_RS07440 (FOC73_07440) - 1524411..1525034 (+) 624 WP_002885512.1 GTP pyrophosphokinase family protein -
  FOC73_RS07445 (FOC73_07445) - 1525036..1525713 (+) 678 WP_002885520.1 response regulator transcription factor -
  FOC73_RS07450 (FOC73_07450) - 1525727..1526950 (+) 1224 WP_002885552.1 HAMP domain-containing sensor histidine kinase -
  FOC73_RS07455 (FOC73_07455) pyrH 1527187..1527924 (+) 738 WP_002885551.1 UMP kinase -
  FOC73_RS07460 (FOC73_07460) frr 1527939..1528496 (+) 558 WP_002885567.1 ribosome recycling factor -

Sequence

Protein


Download         Length: 592 a.a.        Molecular weight: 65058.04 Da        Isoelectric Point: 5.1069

>NTDB_id=449968 FOC73_RS07430 WP_002885473.1 1521754..1523532(+) (rcrQ) [Streptococcus salivarius strain FDAARGOS_771]
MENKPKTSSYKRLKPYIKGFQIPFVLAIFGAIISAVITVIGPDKLKEITNTITEGITPTKMGTIPGIDLDKVASIAMTLA
VLYAISAIVGYLQSFTVATVTQRFSQRFRTAIQKKINSVPLNYFDSHSQGDTLSRVTNDVDLLGQSLSQGLGTLITSSVL
LVAAIIMMFYSNVTMAFTAIGSVLIGFVLVAFIMGFSQPLFKRQQENLANINGYIEEIYTGQAVVTSYNAAQESSQAFKG
LNDKLYKSMWQSQFISGIMMPLMIFIGNFGYVMVCLVGAIKVIDGSLTIGDVVAFMTYVRIFSQPLSQIAQGITQLQSAT
AAIGRIFEFLEEKNMDDESAKTAELTDTKGQVVFDHVSFGYTPEKTIIHDFSALAKPGQKIAIVGPTGAGKTTIVNLLMK
FYNIDQGRITIDGVDTGDMKRETVHDQFSMVLQDTWLFEGTIRDNLIYNQENISDEQVIAAAKAVGVHHFITTLPKGYDT
YLDDSVTLSVGQKQLLTIARALLKDAPLLILDEATSSVDTRTEELIQKAMDKLMEGRTSFVIAHRLSTIRNADLILVMKD
GNIIEQGNHDELMAADGFYADLYNSQFTEEVA

Nucleotide


Download         Length: 1779 bp        

>NTDB_id=449968 FOC73_RS07430 WP_002885473.1 1521754..1523532(+) (rcrQ) [Streptococcus salivarius strain FDAARGOS_771]
ATGGAAAATAAGCCAAAAACATCATCCTATAAACGCTTAAAACCCTATATTAAAGGTTTCCAAATTCCGTTTGTCCTTGC
GATTTTTGGAGCAATTATTTCAGCGGTCATTACAGTTATTGGACCAGATAAGCTTAAAGAAATTACCAATACTATTACTG
AAGGGATTACACCTACCAAAATGGGGACGATTCCAGGTATTGATTTGGACAAGGTAGCAAGTATTGCTATGACCTTGGCT
GTTTTATATGCTATTTCAGCCATTGTGGGTTACTTACAAAGCTTTACGGTTGCGACAGTTACACAACGCTTTTCACAACG
TTTCCGTACAGCTATCCAAAAGAAAATCAACAGTGTTCCTCTTAATTATTTTGATAGTCACTCTCAAGGGGATACCCTCT
CTCGTGTGACCAATGACGTTGACCTTTTGGGACAATCGCTTAGTCAAGGTTTAGGTACCTTGATTACTTCAAGTGTTCTC
TTGGTAGCAGCCATTATTATGATGTTTTACTCAAATGTCACTATGGCTTTCACTGCGATTGGTTCTGTCTTGATAGGTTT
TGTTCTGGTAGCCTTTATCATGGGCTTCTCACAACCCCTTTTCAAACGCCAACAAGAAAATTTGGCTAATATTAATGGTT
ATATTGAAGAAATCTACACGGGTCAAGCAGTCGTAACGAGTTACAATGCTGCTCAAGAAAGTAGTCAAGCTTTCAAGGGA
CTTAATGATAAACTCTATAAATCGATGTGGCAATCACAGTTTATCTCAGGTATTATGATGCCACTTATGATTTTCATTGG
GAACTTTGGTTATGTCATGGTCTGTCTTGTGGGTGCTATCAAAGTTATTGATGGTAGCTTGACTATTGGTGATGTGGTAG
CCTTCATGACCTATGTTCGTATCTTCTCACAACCTCTTTCTCAAATTGCCCAAGGGATTACACAACTCCAATCAGCTACT
GCAGCCATTGGTCGTATCTTTGAATTTTTGGAAGAAAAAAATATGGACGACGAGTCAGCTAAGACTGCTGAGTTGACAGA
TACTAAAGGTCAAGTAGTCTTTGACCATGTTTCCTTTGGTTATACTCCTGAAAAAACTATTATTCATGACTTTTCAGCTC
TTGCTAAGCCGGGTCAAAAGATTGCGATCGTTGGTCCAACGGGTGCTGGTAAGACGACTATTGTTAACCTGCTTATGAAG
TTCTATAACATCGACCAAGGTCGTATCACCATTGACGGTGTGGATACTGGCGACATGAAACGTGAAACTGTCCATGACCA
ATTTTCTATGGTACTTCAAGACACTTGGCTCTTTGAAGGTACTATTCGTGATAATTTGATTTACAACCAAGAAAATATCT
CTGACGAGCAAGTTATTGCTGCAGCCAAGGCTGTCGGTGTTCATCACTTTATCACCACACTTCCAAAAGGTTATGACACT
TATTTGGATGATTCTGTGACATTATCAGTTGGTCAGAAACAGCTCTTGACCATTGCACGTGCCCTTCTGAAGGATGCCCC
TCTTCTTATCTTGGATGAAGCGACATCATCTGTTGACACCAGAACAGAAGAATTGATTCAAAAAGCCATGGACAAACTTA
TGGAAGGTCGGACTTCCTTTGTCATTGCTCACCGCTTATCAACCATTCGAAATGCTGATCTTATCCTTGTGATGAAAGAT
GGGAATATTATTGAACAAGGAAATCATGATGAGCTCATGGCAGCAGATGGTTTCTATGCTGATCTTTATAATAGTCAATT
TACAGAAGAAGTTGCCTAA

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(25-306)

ABC transporter (ABC_tran)

(371-516)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

69.088

100

0.691