Detailed information    

insolico Bioinformatically predicted

Overview

Name   crp   Type   Regulator
Locus tag   G4D73_RS00470 Genome accession   NZ_CP053947
Coordinates   106980..107687 (+) Length   235 a.a.
NCBI ID   WP_004280141.1    Uniprot ID   A0A2K8USH5
Organism   Acinetobacter sp. WY4     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 101980..112687
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  G4D73_RS00435 - 102244..102660 (+) 417 WP_005404969.1 DUF6691 family protein -
  G4D73_RS00440 - 102663..103535 (+) 873 WP_213687114.1 MBL fold metallo-hydrolase -
  G4D73_RS00445 - 103604..104386 (+) 783 WP_213687115.1 sulfite exporter TauE/SafE family protein -
  G4D73_RS00455 - 104555..105085 (-) 531 Protein_92 transposase -
  G4D73_RS00460 - 105306..106343 (+) 1038 WP_005262073.1 metallophosphoesterase -
  G4D73_RS00465 - 106410..106832 (-) 423 WP_004280142.1 OsmC family protein -
  G4D73_RS00470 crp 106980..107687 (+) 708 WP_004280141.1 cAMP-activated global transcriptional regulator CRP Regulator
  G4D73_RS00475 - 107860..108909 (+) 1050 WP_213687116.1 NADP(H)-dependent aldo-keto reductase -
  G4D73_RS00480 - 109053..109418 (+) 366 WP_004646580.1 antitoxin Xre/MbcA/ParS toxin-binding domain-containing protein -
  G4D73_RS00485 clpB 109670..112249 (+) 2580 WP_004280137.1 ATP-dependent chaperone ClpB -

Sequence

Protein


Download         Length: 235 a.a.        Molecular weight: 26255.96 Da        Isoelectric Point: 4.7275

>NTDB_id=449283 G4D73_RS00470 WP_004280141.1 106980..107687(+) (crp) [Acinetobacter sp. WY4]
MTSNFSQLSTDALSPGQLPESVKALLKRAYINRYPKRTTIIDAGSESKSLYLILKGSVSIILREDDDREIVVAYLNAGDF
FGEMGLFEVNPQRTAEVRTRDVCEIAEITYENFHEISKQYPDLSYAVFAQLVRRLKNTTRKVTDLAFIDVSGRIARCLID
LSSQPEAMILPNGRQIRITRQEIGRIVGCSREMVGRVLKTLEEQGMIETDGKAILIFDASLEEASEAVADGAIDE

Nucleotide


Download         Length: 708 bp        

>NTDB_id=449283 G4D73_RS00470 WP_004280141.1 106980..107687(+) (crp) [Acinetobacter sp. WY4]
ATGACTTCAAACTTTTCACAATTAAGCACTGATGCGCTTTCTCCGGGGCAATTACCAGAATCCGTGAAAGCACTGTTAAA
ACGTGCATATATTAATCGTTATCCAAAACGTACCACGATTATTGATGCAGGATCAGAATCTAAATCTTTGTATTTAATTC
TGAAGGGGTCTGTATCTATCATTCTTCGTGAAGATGATGATCGTGAAATTGTCGTGGCATATTTAAATGCGGGTGACTTC
TTTGGGGAAATGGGTCTATTCGAGGTTAATCCACAACGTACTGCGGAAGTTCGTACGCGTGATGTGTGTGAAATTGCCGA
AATTACCTATGAAAACTTTCACGAAATCAGCAAGCAATATCCTGATCTGAGCTATGCGGTATTTGCTCAATTAGTACGTC
GTTTGAAAAATACCACACGTAAAGTCACTGATCTGGCATTTATTGATGTTTCAGGCCGGATTGCACGTTGCCTGATCGAC
CTGTCTTCACAGCCAGAAGCGATGATTTTGCCGAATGGCCGTCAGATTCGTATTACCCGTCAGGAAATTGGCCGTATTGT
TGGCTGTTCCCGTGAAATGGTGGGTCGCGTACTGAAAACGCTAGAAGAGCAAGGCATGATCGAAACCGATGGTAAAGCCA
TCCTGATCTTTGATGCTTCACTAGAAGAAGCGTCTGAAGCAGTGGCAGATGGTGCCATAGACGAATAA

Domains

Predicted by InterproScan.

Cyclic nucleotide-binding domain (cNMP_binding)

(33-120)

Bacterial regulatory proteins, crp family (Crp)

(176-207)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2K8USH5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  crp Acinetobacter baumannii D1279779

91.064

100

0.911
  crp Vibrio cholerae strain A1552

47.317

87.234

0.413
  crp Haemophilus influenzae Rd KW20

48.205

82.979

0.4