Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   ST4067_RS02615 Genome accession   NZ_CP065496
Coordinates   485892..486698 (+) Length   268 a.a.
NCBI ID   WP_011225601.1    Uniprot ID   Q5M5I4
Organism   Streptococcus thermophilus strain 4067     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 480892..491698
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ST4067_RS02595 (ST4067_02600) tuf 481941..483137 (+) 1197 WP_002949971.1 elongation factor Tu -
  ST4067_RS02600 (ST4067_02605) tpiA 483386..484144 (+) 759 WP_002946314.1 triose-phosphate isomerase -
  ST4067_RS02605 (ST4067_02610) tmk 484382..485011 (+) 630 WP_002946312.1 dTMP kinase -
  ST4067_RS02610 (ST4067_02615) - 485020..485895 (+) 876 WP_011225600.1 DNA polymerase III subunit delta' -
  ST4067_RS02615 (ST4067_02620) yaaT 485892..486698 (+) 807 WP_011225601.1 regulatory iron-sulfur-containing complex subunit RicT Regulator
  ST4067_RS02620 (ST4067_02625) yabA 486685..487005 (+) 321 WP_002946304.1 DNA replication initiation control protein YabA -
  ST4067_RS02625 (ST4067_02630) rsmI 487008..487874 (+) 867 WP_002949974.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  ST4067_RS02630 (ST4067_02635) - 488012..489247 (+) 1236 WP_022096936.1 ammonium transporter -
  ST4067_RS02635 (ST4067_02640) - 489258..489599 (+) 342 WP_011680840.1 P-II family nitrogen regulator -
  ST4067_RS02640 (ST4067_02645) - 489697..490353 (+) 657 WP_011680841.1 glycoside hydrolase family 73 protein -
  ST4067_RS02645 (ST4067_02650) - 490376..491197 (+) 822 WP_180477216.1 Cof-type HAD-IIB family hydrolase -
  ST4067_RS02650 (ST4067_02655) - 491216..491687 (-) 472 Protein_460 YgjV family protein -

Sequence

Protein


Download         Length: 268 a.a.        Molecular weight: 29757.22 Da        Isoelectric Point: 4.7058

>NTDB_id=449235 ST4067_RS02615 WP_011225601.1 485892..486698(+) (yaaT) [Streptococcus thermophilus strain 4067]
MTEVIGIKFEENGAVEYVVPDKNYTKGDFVVVLEKKDKRLAQVVMENTVFPEVSLPVDLNRVEGLASKRDFARYDENLLK
AEQSMGVVADLIAQNQLDMKVVDIVFPLNSSYVLISFVAEKRVDFRQLLEDLAAYFKTRIELRQISSREESKIYGGLGPC
GRALCCSSFLGEFPPVSIKMAKNQSLSLNSGKMNGVCGRLMCCLSYEDDFYRDSKASYPDLGEEIETKEGRGQVIAIDVI
AGTVKVMFEKGGAPLTYGVEEVQLNGKA

Nucleotide


Download         Length: 807 bp        

>NTDB_id=449235 ST4067_RS02615 WP_011225601.1 485892..486698(+) (yaaT) [Streptococcus thermophilus strain 4067]
ATGACAGAAGTCATTGGAATCAAATTTGAAGAAAATGGAGCGGTAGAATACGTTGTTCCTGATAAAAATTACACCAAAGG
TGACTTTGTAGTCGTTTTGGAGAAAAAAGATAAGCGTTTAGCCCAGGTTGTTATGGAAAATACTGTTTTTCCAGAGGTTA
GCTTACCTGTGGATTTGAATCGGGTCGAAGGCTTGGCTAGTAAGAGAGATTTCGCTAGATATGATGAAAATCTTTTAAAG
GCTGAACAGAGTATGGGAGTAGTGGCTGATTTAATTGCTCAAAATCAGCTAGATATGAAAGTGGTGGACATAGTCTTTCC
TCTAAATAGCTCTTATGTGCTTATCAGTTTCGTGGCTGAAAAGCGGGTAGATTTTCGTCAATTGCTCGAGGATTTGGCGG
CTTATTTTAAGACGCGAATTGAGTTACGTCAAATTTCCAGTCGTGAGGAATCAAAAATTTATGGTGGTTTAGGTCCTTGT
GGACGTGCACTGTGTTGTTCTAGTTTTTTGGGCGAATTCCCACCGGTATCGATTAAGATGGCTAAAAATCAAAGTTTGTC
CTTGAATTCTGGTAAGATGAACGGTGTCTGTGGACGTCTCATGTGTTGTCTCAGTTATGAAGATGATTTTTACCGAGACA
GTAAGGCTAGTTATCCTGACTTGGGTGAAGAGATTGAGACCAAGGAAGGTAGAGGTCAAGTCATTGCTATTGATGTGATT
GCAGGGACTGTTAAAGTTATGTTTGAAAAAGGGGGAGCTCCCCTAACTTATGGAGTGGAGGAAGTTCAGCTAAATGGAAA
AGCGTGA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(61-145)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q5M5I4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

42.205

98.134

0.414