Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | GGS_RS00670 | Genome accession | NC_018712 |
| Coordinates | 116715..116960 (+) | Length | 81 a.a. |
| NCBI ID | WP_003058569.1 | Uniprot ID | A0ABU0A7C2 |
| Organism | Streptococcus dysgalactiae subsp. equisimilis RE378 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 111715..121960
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GGS_RS00645 (GGS_0124) | - | 113622..113987 (+) | 366 | WP_003055257.1 | DUF1033 family protein | - |
| GGS_RS00650 (GGS_0125) | comGA/cglA | 114068..115009 (+) | 942 | WP_015016543.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| GGS_RS00655 (GGS_0126) | comGB | 114945..115976 (+) | 1032 | WP_042357807.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| GGS_RS00660 (GGS_0127) | comGC | 115978..116304 (+) | 327 | WP_003055259.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| GGS_RS00665 (GGS_0128) | comGD | 116279..116707 (+) | 429 | WP_041788719.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| GGS_RS00670 (GGS_0129) | comGE | 116715..116960 (+) | 246 | WP_003058569.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| GGS_RS00675 (GGS_0130) | comGF | 116941..117381 (+) | 441 | WP_003061780.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| GGS_RS00680 (GGS_0131) | comGG | 117410..117733 (+) | 324 | WP_227985720.1 | competence type IV pilus minor pilin ComGG | - |
| GGS_RS00685 (GGS_0132) | comGH | 117796..118749 (+) | 954 | WP_003060701.1 | class I SAM-dependent methyltransferase | Machinery gene |
| GGS_RS00690 (GGS_0133) | - | 118808..120004 (+) | 1197 | WP_003058485.1 | acetate kinase | - |
| GGS_RS00695 | - | 120310..120516 (+) | 207 | WP_003058508.1 | helix-turn-helix transcriptional regulator | - |
| GGS_RS00700 (GGS_0134) | - | 120619..121299 (+) | 681 | WP_003060329.1 | type II CAAX endopeptidase family protein | - |
| GGS_RS00705 (GGS_0135) | - | 121317..121754 (+) | 438 | WP_012766452.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 81 a.a. Molecular weight: 9280.82 Da Isoelectric Point: 9.6222
>NTDB_id=44868 GGS_RS00670 WP_003058569.1 116715..116960(+) (comGE) [Streptococcus dysgalactiae subsp. equisimilis RE378]
MATGLLVAIVILVLTSLEQSQTRLTYYRSQQEKLNLALMAVQTGQASLNMNDYRLTVLRTEKTLIVRDQEGEVIRIEKKD
R
MATGLLVAIVILVLTSLEQSQTRLTYYRSQQEKLNLALMAVQTGQASLNMNDYRLTVLRTEKTLIVRDQEGEVIRIEKKD
R
Nucleotide
Download Length: 246 bp
>NTDB_id=44868 GGS_RS00670 WP_003058569.1 116715..116960(+) (comGE) [Streptococcus dysgalactiae subsp. equisimilis RE378]
ATGGCAACAGGACTCCTCGTAGCTATTGTCATACTGGTTCTAACAAGTTTGGAGCAAAGTCAGACAAGGTTGACATATTA
TCGCAGCCAACAAGAAAAGCTCAACCTAGCTCTGATGGCAGTACAAACTGGTCAAGCGTCTCTCAATATGAATGATTATC
GTCTGACGGTTTTACGCACAGAAAAAACACTTATCGTTAGGGATCAGGAAGGAGAAGTTATTAGAATTGAAAAAAAGGAC
AGGTAG
ATGGCAACAGGACTCCTCGTAGCTATTGTCATACTGGTTCTAACAAGTTTGGAGCAAAGTCAGACAAGGTTGACATATTA
TCGCAGCCAACAAGAAAAGCTCAACCTAGCTCTGATGGCAGTACAAACTGGTCAAGCGTCTCTCAATATGAATGATTATC
GTCTGACGGTTTTACGCACAGAAAAAACACTTATCGTTAGGGATCAGGAAGGAGAAGTTATTAGAATTGAAAAAAAGGAC
AGGTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Streptococcus mutans UA140 |
41.772 |
97.531 |
0.407 |
| comGE | Streptococcus mutans UA159 |
41.772 |
97.531 |
0.407 |