Detailed information
Bioinformatically predicted
Overview
| Name | pilO | Type | Machinery gene |
| Locus tag | HPY11_RS01450 | Genome accession | NZ_CP053820 |
| Coordinates | 303340..303930 (+) | Length | 196 a.a. |
| NCBI ID | WP_000157690.1 | Uniprot ID | A0A366AJW1 |
| Organism | Vibrio cholerae strain SA10G | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 298340..308930
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HPY11_RS01435 (HPY11_01435) | - | 299137..301614 (-) | 2478 | WP_000668739.1 | penicillin-binding protein 1A | - |
| HPY11_RS01440 (HPY11_01440) | pilM | 301757..302773 (+) | 1017 | WP_071171299.1 | type IV pilus assembly protein PilM | Machinery gene |
| HPY11_RS01445 (HPY11_01445) | pilN | 302763..303347 (+) | 585 | WP_000902746.1 | PilN domain-containing protein | Machinery gene |
| HPY11_RS01450 (HPY11_01450) | pilO | 303340..303930 (+) | 591 | WP_000157690.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| HPY11_RS01455 (HPY11_01455) | pilP | 303920..304438 (+) | 519 | WP_032472751.1 | pilus assembly protein PilP | Machinery gene |
| HPY11_RS01460 (HPY11_01460) | pilQ | 304464..306179 (+) | 1716 | WP_175245885.1 | type IV pilus secretin PilQ | Machinery gene |
| HPY11_RS01465 (HPY11_01465) | aroK | 306366..306890 (+) | 525 | WP_000818616.1 | shikimate kinase AroK | - |
| HPY11_RS01470 (HPY11_01470) | aroB | 306918..308003 (+) | 1086 | WP_175245886.1 | 3-dehydroquinate synthase | - |
Sequence
Protein
Download Length: 196 a.a. Molecular weight: 22877.27 Da Isoelectric Point: 4.4169
>NTDB_id=447829 HPY11_RS01450 WP_000157690.1 303340..303930(+) (pilO) [Vibrio cholerae strain SA10G]
MASLQELELDEISEWPLLPQLVVILLIMLLIQGAGYWFYLMPKQDEIALLKQEEETVKATLRIKANKVAVLPQIQAQLDE
LKERYDFLLRQLPVQKELASMLASVNQLGLDSSLTFTRIDWGERESQEFLYRLPLNIELTGSYHDIGDFSQAIAKLPRII
NFDDVDWQRVSQESSTLHFRVRAYTYQFKQEVDDEK
MASLQELELDEISEWPLLPQLVVILLIMLLIQGAGYWFYLMPKQDEIALLKQEEETVKATLRIKANKVAVLPQIQAQLDE
LKERYDFLLRQLPVQKELASMLASVNQLGLDSSLTFTRIDWGERESQEFLYRLPLNIELTGSYHDIGDFSQAIAKLPRII
NFDDVDWQRVSQESSTLHFRVRAYTYQFKQEVDDEK
Nucleotide
Download Length: 591 bp
>NTDB_id=447829 HPY11_RS01450 WP_000157690.1 303340..303930(+) (pilO) [Vibrio cholerae strain SA10G]
ATGGCTAGTTTGCAAGAGCTAGAACTGGATGAAATTAGTGAATGGCCGCTGCTGCCTCAGTTGGTGGTGATTTTGCTTAT
CATGCTACTGATCCAAGGTGCTGGTTATTGGTTCTATCTCATGCCCAAACAAGACGAGATTGCGCTGTTAAAGCAGGAAG
AGGAAACCGTCAAGGCCACACTGCGCATCAAAGCCAATAAAGTGGCGGTATTGCCGCAGATCCAAGCCCAGTTGGACGAG
CTCAAAGAGCGTTACGATTTTTTACTGCGCCAGCTACCGGTGCAAAAAGAGTTAGCCAGCATGCTGGCGTCAGTCAACCA
GCTTGGGCTCGATAGTTCGCTTACCTTTACGCGGATTGATTGGGGGGAGCGTGAAAGCCAAGAGTTTCTTTACCGCTTAC
CGCTCAATATCGAACTGACGGGAAGCTATCACGATATTGGCGATTTTTCGCAAGCGATTGCCAAGTTACCGCGCATCATC
AACTTCGACGATGTGGACTGGCAGCGGGTCAGCCAAGAGAGTAGCACGCTCCACTTTCGAGTCAGAGCCTACACCTACCA
ATTTAAGCAGGAGGTGGATGATGAAAAATAA
ATGGCTAGTTTGCAAGAGCTAGAACTGGATGAAATTAGTGAATGGCCGCTGCTGCCTCAGTTGGTGGTGATTTTGCTTAT
CATGCTACTGATCCAAGGTGCTGGTTATTGGTTCTATCTCATGCCCAAACAAGACGAGATTGCGCTGTTAAAGCAGGAAG
AGGAAACCGTCAAGGCCACACTGCGCATCAAAGCCAATAAAGTGGCGGTATTGCCGCAGATCCAAGCCCAGTTGGACGAG
CTCAAAGAGCGTTACGATTTTTTACTGCGCCAGCTACCGGTGCAAAAAGAGTTAGCCAGCATGCTGGCGTCAGTCAACCA
GCTTGGGCTCGATAGTTCGCTTACCTTTACGCGGATTGATTGGGGGGAGCGTGAAAGCCAAGAGTTTCTTTACCGCTTAC
CGCTCAATATCGAACTGACGGGAAGCTATCACGATATTGGCGATTTTTCGCAAGCGATTGCCAAGTTACCGCGCATCATC
AACTTCGACGATGTGGACTGGCAGCGGGTCAGCCAAGAGAGTAGCACGCTCCACTTTCGAGTCAGAGCCTACACCTACCA
ATTTAAGCAGGAGGTGGATGATGAAAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilO | Vibrio cholerae strain A1552 |
100 |
100 |
1 |
| pilO | Vibrio campbellii strain DS40M4 |
71.958 |
96.429 |
0.694 |