Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   GE021_RS03035 Genome accession   NZ_CP053792
Coordinates   589450..590259 (+) Length   269 a.a.
NCBI ID   WP_003047202.1    Uniprot ID   A0A2D4DNS0
Organism   Streptococcus canis strain HL_77_1     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 584450..595259
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GE021_RS03015 (GE021_003015) - 584629..585342 (+) 714 WP_260436835.1 MIP/aquaporin family protein -
  GE021_RS11425 - 585470..585601 (+) 132 WP_284119865.1 hypothetical protein -
  GE021_RS03020 (GE021_003020) - 586216..587211 (+) 996 WP_125074097.1 DUF3114 domain-containing protein -
  GE021_RS03025 (GE021_003025) vicR 587391..588101 (+) 711 WP_125074098.1 response regulator YycF Regulator
  GE021_RS03030 (GE021_003030) vicK 588094..589446 (+) 1353 WP_125074099.1 cell wall metabolism sensor histidine kinase VicK Regulator
  GE021_RS03035 (GE021_003035) vicX 589450..590259 (+) 810 WP_003047202.1 MBL fold metallo-hydrolase Regulator
  GE021_RS03040 (GE021_003040) rnc 590360..591052 (+) 693 WP_003047203.1 ribonuclease III -
  GE021_RS03045 (GE021_003045) smc 591053..594598 (+) 3546 WP_125074100.1 chromosome segregation protein SMC -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30125.32 Da        Isoelectric Point: 6.0739

>NTDB_id=447269 GE021_RS03035 WP_003047202.1 589450..590259(+) (vicX) [Streptococcus canis strain HL_77_1]
MIESGFKYSILASGSTGNCFYLETPKKRLLIDAGLTGKKITSLLAEIDRKPEDLDAILITHEHSDHIKGVGVMARKYHLD
VYANEKTWQLMDERNMLGKLDASQKHIFQRDKMLTFGDVDIESFGVSHDAVDPQFYRIMKDNKSFVMLTDTGYVSDRMTG
IIENADGYLIESNHDIEILRSGSYPWSLKQRILSDLGHLSNEDGAGAMIRSLGHKTKKIYLGHLSKENNIKELAHMTMVN
QLAMADLGVGTDFTVHDTSPDTACPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=447269 GE021_RS03035 WP_003047202.1 589450..590259(+) (vicX) [Streptococcus canis strain HL_77_1]
ATGATTGAAAGCGGTTTTAAATATAGTATTTTGGCATCTGGCTCCACAGGCAATTGTTTTTATTTAGAAACACCTAAAAA
GCGTTTATTAATTGACGCGGGGTTGACTGGTAAGAAAATCACCAGTCTCCTTGCTGAAATTGACCGCAAGCCTGAAGATT
TAGATGCTATTTTGATTACCCATGAGCACTCTGACCATATTAAGGGAGTGGGGGTCATGGCTCGTAAATACCATTTGGAC
GTCTATGCCAATGAAAAAACGTGGCAGTTGATGGATGAGCGCAATATGCTAGGAAAGCTTGATGCCTCACAAAAACATAT
TTTCCAAAGAGATAAGATGTTGACCTTTGGAGATGTTGACATTGAAAGTTTTGGGGTTAGTCATGATGCTGTTGATCCCC
AGTTTTACCGTATCATGAAAGACAACAAATCGTTTGTAATGCTGACTGATACAGGTTATGTTAGCGATCGAATGACAGGT
ATTATTGAAAATGCAGATGGTTACTTGATTGAGTCCAATCATGACATTGAAATTTTAAGATCAGGCTCTTACCCTTGGAG
TTTAAAGCAACGCATTTTGTCAGATCTGGGTCATTTGTCAAATGAAGATGGTGCTGGGGCCATGATTAGAAGTTTGGGGC
ATAAGACGAAAAAAATCTATTTGGGCCATTTGAGTAAAGAAAATAACATCAAAGAGCTGGCTCACATGACCATGGTTAAC
CAATTAGCCATGGCAGACTTGGGAGTTGGAACAGATTTTACGGTTCATGACACTTCCCCAGACACGGCCTGTCCCTTGAC
GGATATTTAA

Domains

Predicted by InterproScan.

Beta-lactamase superfamily domain (Lactamase_B_2)

(28-216)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2D4DNS0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

76.208

100

0.762