Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicK   Type   Regulator
Locus tag   GE021_RS03030 Genome accession   NZ_CP053792
Coordinates   588094..589446 (+) Length   450 a.a.
NCBI ID   WP_125074099.1    Uniprot ID   A0A3P5Y8P3
Organism   Streptococcus canis strain HL_77_1     
Function   repress comCDE expression; repress comX expression (predicted from homology)   
Competence regulation

Genomic Context

Location: 583094..594446
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GE021_RS03005 (GE021_003005) dhaL 583666..584241 (+) 576 WP_125074094.1 dihydroxyacetone kinase subunit DhaL -
  GE021_RS03010 (GE021_003010) dhaM 584241..584618 (+) 378 WP_125074095.1 dihydroxyacetone kinase phosphoryl donor subunit DhaM -
  GE021_RS03015 (GE021_003015) - 584629..585342 (+) 714 WP_260436835.1 MIP/aquaporin family protein -
  GE021_RS11425 - 585470..585601 (+) 132 WP_284119865.1 hypothetical protein -
  GE021_RS03020 (GE021_003020) - 586216..587211 (+) 996 WP_125074097.1 DUF3114 domain-containing protein -
  GE021_RS03025 (GE021_003025) vicR 587391..588101 (+) 711 WP_125074098.1 response regulator YycF Regulator
  GE021_RS03030 (GE021_003030) vicK 588094..589446 (+) 1353 WP_125074099.1 cell wall metabolism sensor histidine kinase VicK Regulator
  GE021_RS03035 (GE021_003035) vicX 589450..590259 (+) 810 WP_003047202.1 MBL fold metallo-hydrolase Regulator
  GE021_RS03040 (GE021_003040) rnc 590360..591052 (+) 693 WP_003047203.1 ribonuclease III -

Sequence

Protein


Download         Length: 450 a.a.        Molecular weight: 51434.92 Da        Isoelectric Point: 5.3982

>NTDB_id=447268 GE021_RS03030 WP_125074099.1 588094..589446(+) (vicK) [Streptococcus canis strain HL_77_1]
MTRDIIGNLSAFELAILLLLVFVAFYFIHLAVRDYRNARIIRMMSHKIRDLINGRYTDMINEKADIELMELADQLNDLSD
VFRLTHENLAQEKNRLASILAYMSDGVLATDRSGKIIMINETARKQLNLTKEQALEKNITDLLEGDTPYTYRDLVSKTPV
VTVNSRNDMGEFVSLRLRFALNRRESGFISGLVVVLHDTTEQEKEERERRLFVSNVSHELRTPLTSVKSYLEALDEGALT
EDIAPSFIKVSLDETNRMMRMISDLLNLSRIDNQVTQLSVEMTNFTAFMTSILNRFDLVKNQHTGTGKVYEIVRDYPITS
VWLEIDNDKMTQVIENILNNAIKYSPDGGKITVRMKTTDTQLIISISDQGLGIPKKDLPLIFDRFYRVDKARSRAQGGTG
LGLAIAKEIIKQHHGFIWAKSDYGKGSTFTIVLPYEKDAAIYEEWEEDID

Nucleotide


Download         Length: 1353 bp        

>NTDB_id=447268 GE021_RS03030 WP_125074099.1 588094..589446(+) (vicK) [Streptococcus canis strain HL_77_1]
ATGACTAGAGATATCATCGGGAATTTATCCGCTTTTGAATTAGCGATTCTCTTATTGCTTGTTTTTGTTGCCTTTTACTT
TATTCATTTAGCAGTACGTGATTACCGCAATGCTCGTATTATTCGAATGATGAGCCACAAGATCAGGGATCTGATCAATG
GTCGTTATACCGATATGATTAACGAAAAGGCTGACATTGAATTGATGGAATTGGCAGATCAATTAAACGATCTTTCAGAT
GTTTTTCGCCTAACCCATGAAAATCTTGCCCAGGAAAAAAACCGCCTAGCAAGCATTTTGGCTTATATGTCAGATGGGGT
GCTTGCCACTGACCGGTCTGGGAAAATTATCATGATTAACGAAACAGCTCGCAAGCAATTAAATTTAACTAAGGAACAAG
CTCTTGAAAAGAATATTACAGATTTGTTAGAGGGAGACACGCCTTATACCTACCGTGACTTGGTGTCCAAAACACCAGTG
GTAACTGTTAATAGCCGAAATGATATGGGCGAATTTGTCTCATTGCGTCTGCGCTTTGCCTTGAACAGACGCGAAAGTGG
CTTTATTTCAGGCTTGGTCGTGGTTTTACATGACACCACAGAACAAGAAAAAGAAGAACGTGAACGCCGTCTTTTTGTTT
CCAATGTCAGCCATGAGCTTAGGACACCTTTGACATCGGTTAAATCTTATTTAGAGGCCCTTGACGAAGGTGCCCTCACA
GAAGACATTGCGCCAAGCTTTATCAAGGTTTCTCTTGATGAAACCAATCGAATGATGCGAATGATTTCCGATCTTTTGAA
CCTGTCTCGCATTGATAACCAAGTGACCCAGTTGTCAGTCGAAATGACCAATTTCACAGCCTTTATGACCTCTATCCTGA
ACCGATTTGACCTAGTTAAAAACCAACATACGGGTACAGGCAAGGTCTATGAAATTGTGAGGGATTACCCCATTACTTCT
GTTTGGTTAGAAATTGACAATGACAAGATGACACAGGTTATTGAAAATATTCTTAATAATGCCATTAAATATTCTCCTGA
TGGTGGGAAAATCACTGTTCGCATGAAAACAACAGACACGCAGTTGATTATTTCCATTTCTGATCAGGGTCTCGGCATTC
CTAAAAAGGATTTGCCCCTTATTTTTGACCGATTTTACCGTGTGGACAAGGCAAGAAGCCGTGCCCAAGGCGGTACTGGA
CTAGGCCTTGCCATTGCTAAAGAAATTATCAAGCAGCATCACGGCTTCATCTGGGCTAAAAGTGATTATGGCAAGGGATC
AACCTTTACCATTGTCTTGCCTTATGAAAAAGATGCTGCCATTTATGAAGAATGGGAGGAAGATATAGATTAA

Domains

Predicted by InterproScan.

His Kinase A (phospho-acceptor) domain (HisKA)

(209-273)

PAS fold (PAS)

(95-164)

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(326-436)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A3P5Y8P3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicK Streptococcus mutans UA159

73.913

92

0.68
  micB Streptococcus pneumoniae Cp1015

67.059

94.444

0.633