Detailed information    

insolico Bioinformatically predicted

Overview


Name   ccpA   Type   Regulator
Locus tag   GE021_RS02940 Genome accession   NZ_CP053792
Coordinates   569813..570814 (+) Length   333 a.a.
NCBI ID   WP_125074084.1    Uniprot ID   A0A3P5Y6B4
Organism   Streptococcus canis strain HL_77_1     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 564813..575814
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GE021_RS02910 (GE021_002910) smpB 565045..565512 (+) 468 WP_125074080.1 SsrA-binding protein SmpB -
  GE021_RS02915 (GE021_002915) - 565670..566107 (+) 438 WP_254388123.1 cell division protein FtsW -
  GE021_RS02920 (GE021_002920) - 566239..567165 (-) 927 WP_125074081.1 glycosyltransferase family 2 protein -
  GE021_RS02925 (GE021_002925) - 567453..567830 (-) 378 WP_003047144.1 VOC family protein -
  GE021_RS02930 (GE021_002930) - 567840..568505 (-) 666 WP_164406381.1 NAD(P)H-dependent oxidoreductase -
  GE021_RS02935 (GE021_002935) - 568554..569639 (-) 1086 WP_125074083.1 Xaa-Pro peptidase family protein -
  GE021_RS02940 (GE021_002940) ccpA 569813..570814 (+) 1002 WP_125074084.1 catabolite control protein A Regulator
  GE021_RS02945 (GE021_002945) - 570974..572424 (+) 1451 Protein_544 alpha-amylase -
  GE021_RS02950 (GE021_002950) - 572502..573500 (+) 999 WP_125074086.1 glycosyltransferase -
  GE021_RS02955 (GE021_002955) - 573502..574836 (+) 1335 WP_003047159.1 glycosyltransferase family 4 protein -

Sequence


Protein


Download         Length: 333 a.a.        Molecular weight: 36705.81 Da        Isoelectric Point: 5.4980

>NTDB_id=447266 GE021_RS02940 WP_125074084.1 569813..570814(+) (ccpA) [Streptococcus canis strain HL_77_1]
MNTDDTITIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNIANSYFS
ILAKGIDDIAAMYKYNIVLASSDEDDDKEVNVVNTLFAKQVDGIIFMGHHLTEKIRAEFSRSRTPIVLAGTVDLDHQLPS
VNIDYKAAVSNVVDILAENHMSIAFVSGPLIDDINGKVRLAGYKEGLKQNKLDFKEGLVFEANYSYKEGFELAQRVINSG
ATAAYVAEDELAAGLLNGLFEAGKRVPEDFEIITSNDSPVVQYTRPNLSSISQPVYDLGAVSMRMLTKIMNKEELEEKEI
LLNHGIKKRGTTR

Nucleotide


Download         Length: 1002 bp        

>NTDB_id=447266 GE021_RS02940 WP_125074084.1 569813..570814(+) (ccpA) [Streptococcus canis strain HL_77_1]
ATGAATACAGATGATACCATCACGATTTACGATGTTGCCCGTGAAGCTGGTGTTTCAATGGCAACCGTTAGTCGTGTTGT
TAATGGCAACAAAAACGTTAAGGAAAACACACGTAAGAAAGTTTTAGAAGTCATTGACCGCTTAGATTATCGTCCAAATG
CTGTCGCGCGTGGACTTGCCAGCAAAAAAACAACAACAGTTGGTGTTGTGATTCCTAATATTGCAAACAGTTACTTTTCT
ATCTTAGCCAAAGGTATTGATGATATCGCTGCTATGTATAAATATAATATTGTGCTTGCCTCCAGTGATGAGGATGATGA
CAAAGAGGTTAACGTTGTTAACACTCTCTTTGCTAAGCAGGTGGACGGTATTATTTTTATGGGGCATCACTTGACTGAAA
AGATTCGTGCGGAATTCTCACGTTCACGGACACCGATTGTTTTGGCAGGAACCGTAGACCTCGATCATCAACTACCAAGT
GTTAATATTGACTATAAAGCAGCTGTCTCAAATGTGGTTGATATTTTAGCGGAAAACCATATGAGCATTGCTTTTGTATC
TGGTCCTCTCATTGATGACATCAATGGCAAGGTACGCTTAGCGGGCTACAAAGAAGGTTTGAAGCAAAACAAACTAGATT
TCAAAGAAGGGCTTGTTTTTGAAGCAAATTACTCTTATAAGGAAGGCTTTGAACTAGCACAACGCGTGATTAATTCAGGG
GCAACAGCAGCTTATGTTGCTGAGGATGAATTGGCAGCAGGCCTTTTAAATGGCTTATTTGAAGCAGGTAAACGCGTGCC
AGAAGACTTTGAAATCATCACAAGCAACGATTCGCCAGTGGTTCAATACACTCGTCCAAACTTGAGTTCTATCAGTCAAC
CCGTTTACGATTTGGGAGCTGTCAGCATGCGCATGTTGACTAAAATCATGAACAAAGAAGAATTGGAAGAAAAAGAAATT
CTCTTGAACCACGGCATCAAAAAACGTGGTACAACCAGATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A3P5Y6B4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

78.078

100

0.781

  ccpA Streptococcus pneumoniae D39

76.276

100

0.763

  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

55.287

99.399

0.55