Detailed information NTG0446581

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: HNV93_RS10180
• Genome accession: NZ_CP053717
• Coordinates: 2136942..2138090 (-)
• Length: 382 a.a.
• NCBI ID: WP_007410270.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain A2
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 2131942..2143090

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HNV93_RS10150	-	2132078..2132836 (-)	759	WP_007609404.1	ABC transporter ATP-binding protein	-
HNV93_RS10155	-	2132830..2133777 (-)	948	WP_014416905.1	iron chelate uptake ABC transporter family permease subunit	-
HNV93_RS10160	ceuB	2133767..2134720 (-)	954	WP_032872883.1	ABC transporter permease	Machinery gene
HNV93_RS10165	-	2135134..2136498 (+)	1365	WP_007609394.1	aspartate kinase	-
HNV93_RS10170	-	2136593..2136688 (+)	96	WP_021495118.1	YjcZ family sporulation protein	-
HNV93_RS10175	phrC	2136839..2136958 (-)	120	WP_003156334.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
HNV93_RS10180	rapC	2136942..2138090 (-)	1149	WP_007410270.1	Rap family tetratricopeptide repeat protein	Regulator
HNV93_RS10185	-	2138243..2139676 (-)	1434	WP_161503657.1	HAMP domain-containing sensor histidine kinase	-
HNV93_RS10190	-	2139663..2140346 (-)	684	WP_032872879.1	response regulator transcription factor	-
HNV93_RS10195	-	2140559..2141989 (+)	1431	WP_032872876.1	ABC transporter permease	-
HNV93_RS10200	-	2142004..2142687 (+)	684	WP_032872874.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45475.70 Da
• Isoelectric Point: 4.9916

>NTDB_id=446581 HNV93_RS10180 WP_007410270.1 2136942..2138090(-) (rapC) [Bacillus velezensis strain A2]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDHMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQDRIG
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKEKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEET
ISACFRYLEDKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=446581 HNV93_RS10180 WP_007410270.1 2136942..2138090(-) (rapC) [Bacillus velezensis strain A2]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAAATTAACGAGTGGTACCGATACATCAGAACATTCAGCGT
GCCGGATGCGGAGATCTTGAAGGCCGAGATCAAACAAGAGCTTGACCATATGGAGCCTGATTCGAACTTAGTGCTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGACTACTTGGAGCCGCTGGAAAAACTGAAGATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTTGATAACATTGATAACAGCCAGGCCGGCCTCAAGGGGCTTCTCGATTATTACGTCAATTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATCTCAGCGATTACATATTATAAACAAGCTGAGAAAAAACTGGCCT
TCGTATCGGACCATGTGGAACGGGCGGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAACGCTTATGAAATTTACGTGGAGCAGGACACATATAACGTCCGGATTATTCAATGCCATTT
TGTATTCGGCGTCAATTTAATGGATGAAAGGCGCTTTGAACAGGCGGCCAAACATTTTCAGCACGCTCTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCTGTATAACCTCGGACTGTGCTACTACAATCAGGACCGCATCGGC
GAAGCGATTCCGTACTTTGAACGGGCGGTTGATACATTTGAATCACAAAGAATCGTCAATTCTCTTCCTCAAGCATATTT
TCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGAAAAAGCGTCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTACACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGATGAGGAAACA
ATCAGCGCGTGTTTCCGTTACCTGGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAGATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAGGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	82.461	100	0.825
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568