Detailed information NTG0044646

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: BANAU_RS18090
• Genome accession: NC_017061
• Coordinates: 3693063..3694226 (-)
• Length: 387 a.a.
• NCBI ID: WP_007407484.1
• Uniprot ID: A3KLC1
• Organism: Bacillus velezensis YAU B9601-Y2
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3688063..3699226

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BANAU_RS18060 (BANAU_3448)	-	3688328..3688747 (-)	420	WP_014419009.1	TIGR03826 family flagellar region protein	-
BANAU_RS18065	comFC	3688821..3689510 (-)	690	WP_197535984.1	ComF family protein	Machinery gene
BANAU_RS18070 (BANAU_3450)	-	3689516..3689800 (-)	285	WP_014419011.1	late competence development ComFB family protein	-
BANAU_RS18075 (BANAU_3451)	comFA	3689858..3691243 (-)	1386	WP_014419012.1	DEAD/DEAH box helicase	Machinery gene
BANAU_RS18080 (BANAU_3452)	-	3691351..3692199 (-)	849	WP_003151387.1	DegV family protein	-
BANAU_RS18085 (BANAU_3453)	degU	3692297..3692986 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
BANAU_RS18090 (BANAU_3454)	degS	3693063..3694226 (-)	1164	WP_007407484.1	two-component sensor histidine kinase DegS	Regulator
BANAU_RS18095 (BANAU_3455)	-	3694449..3695096 (+)	648	WP_007614107.1	YigZ family protein	-
BANAU_RS18100 (BANAU_3456)	-	3695101..3696315 (+)	1215	WP_014419013.1	LCP family protein	-
BANAU_RS18105 (BANAU_3457)	-	3696405..3697481 (-)	1077	WP_003151382.1	glycosyltransferase family 4 protein	-
BANAU_RS18110 (BANAU_3458)	tuaH	3697614..3698810 (-)	1197	WP_014419014.1	teichuronic acid biosynthesis protein TuaH	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.78 Da
• Isoelectric Point: 6.8616

>NTDB_id=44646 BANAU_RS18090 WP_007407484.1 3693063..3694226(-) (degS) [Bacillus velezensis YAU B9601-Y2]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENQRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=44646 BANAU_RS18090 WP_007407484.1 3693063..3694226(-) (degS) [Bacillus velezensis YAU B9601-Y2]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGTAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TCTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAACAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTAGGTCTTCAGGAAATCATTGAAC
GGTCAGAATCGTTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGTTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAAATGCTGGCAAATGTCATGATGAGATCTGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTACGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGCATCGGAGACACGGAGAACCAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAGCATTCAGAATCAGAGGAAATTACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTCATCATTAAGGACAATGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

3D structure

• AlphaFold DB: A3KLC1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.584	99.483	0.951