Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | EYQ96_RS07945 | Genome accession | NZ_CP053477 |
| Coordinates | 1519748..1520722 (+) | Length | 324 a.a. |
| NCBI ID | WP_023372661.1 | Uniprot ID | - |
| Organism | Staphylococcus warneri strain WB224 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1514748..1525722
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EYQ96_RS07910 (EYQ96_07930) | rpmG | 1515191..1515340 (+) | 150 | WP_002451882.1 | 50S ribosomal protein L33 | - |
| EYQ96_RS07915 (EYQ96_07935) | - | 1515570..1516124 (+) | 555 | WP_023372671.1 | 5-formyltetrahydrofolate cyclo-ligase | - |
| EYQ96_RS07920 (EYQ96_07940) | - | 1516121..1517575 (+) | 1455 | WP_023372669.1 | rhomboid family intramembrane serine protease | - |
| EYQ96_RS07925 (EYQ96_07945) | - | 1517565..1517768 (+) | 204 | WP_002451885.1 | YqgQ family protein | - |
| EYQ96_RS07930 (EYQ96_07950) | - | 1517765..1518751 (+) | 987 | WP_023372667.1 | ROK family glucokinase | - |
| EYQ96_RS07935 (EYQ96_07955) | - | 1518751..1519074 (+) | 324 | WP_023372665.1 | MTH1187 family thiamine-binding protein | - |
| EYQ96_RS07940 (EYQ96_07960) | - | 1519078..1519701 (+) | 624 | WP_023372663.1 | MBL fold metallo-hydrolase | - |
| EYQ96_RS07945 (EYQ96_07965) | comGA | 1519748..1520722 (+) | 975 | WP_023372661.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| EYQ96_RS07950 (EYQ96_07970) | comGB | 1520694..1521761 (+) | 1068 | WP_114599431.1 | competence type IV pilus assembly protein ComGB | - |
| EYQ96_RS07955 (EYQ96_07975) | comGC | 1521774..1522091 (+) | 318 | WP_023372658.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| EYQ96_RS07960 (EYQ96_07980) | comGD | 1522069..1522509 (+) | 441 | WP_041613568.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| EYQ96_RS07965 (EYQ96_07985) | - | 1522743..1523204 (+) | 462 | WP_231307184.1 | hypothetical protein | - |
| EYQ96_RS07970 (EYQ96_07990) | - | 1523363..1523881 (+) | 519 | WP_023372652.1 | shikimate kinase | - |
| EYQ96_RS07975 (EYQ96_07995) | gcvT | 1524054..1525145 (+) | 1092 | WP_023372650.1 | glycine cleavage system aminomethyltransferase GcvT | - |
Sequence
Protein
Download Length: 324 a.a. Molecular weight: 37123.30 Da Isoelectric Point: 9.1190
>NTDB_id=444933 EYQ96_RS07945 WP_023372661.1 1519748..1520722(+) (comGA) [Staphylococcus warneri strain WB224]
MKILFQEIINKAIAYKASDVHFIPMEHYVHIKFRVNDTLMSYETLDIGIYRKLLVFMKFQAGLDVSTQQIAQSGRYTYKL
RSVYYLRISTLPLSIGSESCVIRIVPQYFQNKKETYEFNDFKHLMNKKQGLLLFTGPTGSGKSTLMYQMVMYAQKELNLN
VISIEDPVEQILKGITQISVNTKAGITYASSFKAILRCDPDVILIGEIRDAEIAKYVFQASLSGHLVLSTLHANDCKGAL
LRLLEMGITIQELSQAINLISNQRLITTSSQQRQLVCELMFKNQINYFFEHNQTMPRSFKRLSSKLDDMTKEGIICESIA
DKYI
MKILFQEIINKAIAYKASDVHFIPMEHYVHIKFRVNDTLMSYETLDIGIYRKLLVFMKFQAGLDVSTQQIAQSGRYTYKL
RSVYYLRISTLPLSIGSESCVIRIVPQYFQNKKETYEFNDFKHLMNKKQGLLLFTGPTGSGKSTLMYQMVMYAQKELNLN
VISIEDPVEQILKGITQISVNTKAGITYASSFKAILRCDPDVILIGEIRDAEIAKYVFQASLSGHLVLSTLHANDCKGAL
LRLLEMGITIQELSQAINLISNQRLITTSSQQRQLVCELMFKNQINYFFEHNQTMPRSFKRLSSKLDDMTKEGIICESIA
DKYI
Nucleotide
Download Length: 975 bp
>NTDB_id=444933 EYQ96_RS07945 WP_023372661.1 1519748..1520722(+) (comGA) [Staphylococcus warneri strain WB224]
TTGAAGATATTATTTCAAGAAATCATTAATAAAGCCATAGCATATAAAGCAAGCGACGTACATTTTATCCCAATGGAACA
TTATGTTCATATAAAATTTAGAGTGAATGATACTTTAATGTCATACGAAACACTAGATATAGGGATTTATCGTAAATTAC
TCGTTTTTATGAAATTTCAAGCAGGATTGGATGTGTCGACACAGCAAATCGCTCAAAGTGGCCGTTACACATATAAATTA
AGGTCAGTTTATTACTTACGTATTTCAACGCTCCCGTTATCAATCGGTAGTGAAAGTTGTGTAATTCGTATAGTGCCTCA
ATATTTTCAAAATAAAAAGGAGACATATGAATTTAACGATTTTAAACATTTAATGAATAAGAAACAAGGATTACTGCTTT
TTACAGGACCTACTGGTTCAGGAAAAAGCACACTCATGTACCAAATGGTTATGTATGCTCAAAAAGAATTGAATCTCAAT
GTCATATCTATCGAAGACCCCGTAGAACAAATTTTAAAAGGGATTACTCAAATCTCAGTAAATACTAAGGCTGGTATTAC
TTATGCAAGTTCATTTAAAGCAATACTTCGCTGCGATCCAGATGTTATTTTGATTGGGGAAATCAGAGACGCTGAAATAG
CAAAATATGTGTTTCAAGCGAGTTTAAGTGGCCATTTAGTACTAAGTACATTACATGCTAATGATTGTAAAGGAGCATTG
CTAAGGTTATTAGAGATGGGTATTACGATTCAAGAACTATCACAAGCCATAAATTTAATATCTAATCAACGTTTAATTAC
CACATCTAGCCAACAACGCCAATTAGTTTGTGAACTTATGTTCAAAAATCAAATCAATTATTTTTTTGAACATAACCAAA
CAATGCCTAGATCATTTAAGCGATTATCTTCAAAACTAGATGATATGACTAAAGAAGGAATTATATGTGAATCAATTGCT
GATAAATATATTTAA
TTGAAGATATTATTTCAAGAAATCATTAATAAAGCCATAGCATATAAAGCAAGCGACGTACATTTTATCCCAATGGAACA
TTATGTTCATATAAAATTTAGAGTGAATGATACTTTAATGTCATACGAAACACTAGATATAGGGATTTATCGTAAATTAC
TCGTTTTTATGAAATTTCAAGCAGGATTGGATGTGTCGACACAGCAAATCGCTCAAAGTGGCCGTTACACATATAAATTA
AGGTCAGTTTATTACTTACGTATTTCAACGCTCCCGTTATCAATCGGTAGTGAAAGTTGTGTAATTCGTATAGTGCCTCA
ATATTTTCAAAATAAAAAGGAGACATATGAATTTAACGATTTTAAACATTTAATGAATAAGAAACAAGGATTACTGCTTT
TTACAGGACCTACTGGTTCAGGAAAAAGCACACTCATGTACCAAATGGTTATGTATGCTCAAAAAGAATTGAATCTCAAT
GTCATATCTATCGAAGACCCCGTAGAACAAATTTTAAAAGGGATTACTCAAATCTCAGTAAATACTAAGGCTGGTATTAC
TTATGCAAGTTCATTTAAAGCAATACTTCGCTGCGATCCAGATGTTATTTTGATTGGGGAAATCAGAGACGCTGAAATAG
CAAAATATGTGTTTCAAGCGAGTTTAAGTGGCCATTTAGTACTAAGTACATTACATGCTAATGATTGTAAAGGAGCATTG
CTAAGGTTATTAGAGATGGGTATTACGATTCAAGAACTATCACAAGCCATAAATTTAATATCTAATCAACGTTTAATTAC
CACATCTAGCCAACAACGCCAATTAGTTTGTGAACTTATGTTCAAAAATCAAATCAATTATTTTTTTGAACATAACCAAA
CAATGCCTAGATCATTTAAGCGATTATCTTCAAAACTAGATGATATGACTAAAGAAGGAATTATATGTGAATCAATTGCT
GATAAATATATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Staphylococcus aureus MW2 |
74.383 |
100 |
0.744 |
| comGA | Staphylococcus aureus N315 |
74.383 |
100 |
0.744 |