Detailed information NTG0444710

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: HLV59_RS17315
• Genome accession: NZ_CP053391
• Coordinates: 3704407..3705819 (+)
• Length: 470 a.a.
• NCBI ID: WP_171430445.1
• Uniprot ID: -
• Organism: Acinetobacter lactucae isolate QL-1
• Function: regulation of type IV pilus assembly (predicted from homology) Competence regulation

Genomic Context

Location: 3699407..3710819

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HLV59_RS17295	thrC	3699643..3700782 (+)	1140	WP_002048893.1	threonine synthase	-
HLV59_RS17300	pbpG	3700894..3701940 (-)	1047	WP_016144106.1	D-alanyl-D-alanine endopeptidase PBP7/8	-
HLV59_RS17305	-	3702153..3702788 (+)	636	WP_002121174.1	response regulator	-
HLV59_RS17310	pilS	3702799..3704382 (+)	1584	WP_216606742.1	PAS domain-containing sensor histidine kinase	Regulator
HLV59_RS17315	pilR	3704407..3705819 (+)	1413	WP_171430445.1	sigma-54 dependent transcriptional regulator	Regulator
HLV59_RS17320	-	3705823..3707007 (-)	1185	WP_031947156.1	S41 family peptidase	-
HLV59_RS17325	gpmI	3707023..3708570 (-)	1548	WP_016144102.1	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	-
HLV59_RS17330	lptG	3708697..3709767 (-)	1071	WP_016144101.1	LPS export ABC transporter permease LptG	-

Sequence

Protein

• Length: 470 a.a.
• Molecular weight: 52696.80 Da
• Isoelectric Point: 6.4520

>NTDB_id=444710 HLV59_RS17315 WP_171430445.1 3704407..3705819(+) (pilR) [Acinetobacter lactucae isolate QL-1]
MAEQQPLVLLVDDEEDLCLLMQMTLARMGIKTHLAYRVEQAKQLFTQFHYDACLTDLNLPDGSGLELVKHVSQTYPHTPI
AVLTAYGNMDIAIAALKAGAFDFVSKPINQIHLDQLLKKALNQPKPEHEFGETTLENDLLIGRSPPIQNLRTAIKKIARS
QAPVFVTGESGTGKEVVANLIHRLSNRSEGPFIAINCGAIPTELMESELFGHKKGSFTGATQDKQGLILSAHGGSLFLDE
IAELPLTMQVKLLRAVQEKKIRPVGSDQEIDVDFRVISASHQDLDVLVQQGKFRQDLFFRIHVMDIMLPPLRDRGGDILL
LANHFIQKVCTEWGISNKQLTASAETYLLQQDFPGNVRELRNMIERAITLSEDECIDLTHLAPPLRASSASPQIVTKQLN
QTPNVQTHPKFPMEGLERYLENIEKDILLNALNMTHWNRTLAAKKLGMTFRSLRYRLKKFGLDTEMGEEV

Nucleotide

• Length: 1413 bp

>NTDB_id=444710 HLV59_RS17315 WP_171430445.1 3704407..3705819(+) (pilR) [Acinetobacter lactucae isolate QL-1]
ATGGCAGAACAGCAACCACTCGTTTTGCTTGTAGACGATGAAGAAGATTTGTGCCTGTTAATGCAAATGACTCTTGCACG
AATGGGGATTAAGACACATCTTGCTTATCGGGTTGAACAGGCCAAACAACTCTTTACTCAGTTTCATTACGATGCATGCT
TGACCGATTTAAATCTACCTGACGGTAGTGGTTTAGAATTGGTTAAACATGTTTCTCAAACTTACCCCCACACCCCCATT
GCAGTTTTAACTGCATACGGAAATATGGACATTGCAATTGCTGCATTAAAAGCGGGAGCTTTTGATTTTGTCAGCAAACC
GATTAACCAAATTCATTTAGATCAGTTGTTAAAAAAGGCACTTAACCAGCCAAAACCAGAGCATGAGTTTGGTGAAACAA
CATTAGAAAATGACTTATTAATTGGGCGTTCACCACCTATACAAAACTTACGGACAGCTATTAAAAAAATAGCCCGCTCC
CAAGCGCCTGTATTTGTTACAGGCGAGTCTGGTACGGGTAAAGAAGTTGTTGCCAATCTTATTCACCGCTTAAGCAACCG
CAGTGAAGGACCATTTATTGCAATTAACTGTGGAGCAATCCCAACTGAGCTCATGGAAAGTGAACTTTTCGGGCATAAAA
AAGGGAGCTTTACTGGCGCGACTCAAGACAAACAAGGTCTTATTTTATCGGCACACGGCGGCAGTTTATTTTTAGATGAA
ATTGCCGAATTGCCGTTAACCATGCAAGTTAAATTGCTTCGCGCAGTACAAGAGAAAAAAATTCGCCCAGTAGGTTCTGA
TCAGGAAATTGATGTTGATTTTCGAGTAATTAGTGCGAGTCACCAAGATTTAGATGTGTTAGTCCAACAAGGTAAATTCC
GTCAGGACTTATTTTTCCGTATTCATGTTATGGATATTATGCTGCCGCCACTGCGTGACCGCGGTGGAGATATTTTGCTA
TTGGCCAACCATTTTATTCAAAAGGTTTGTACGGAATGGGGAATTTCAAACAAGCAATTAACGGCGAGTGCTGAAACTTA
TTTATTACAGCAAGACTTTCCGGGTAATGTGCGTGAATTAAGAAATATGATTGAACGAGCTATTACTTTAAGTGAGGATG
AATGTATTGATTTAACACATTTAGCACCTCCCCTGAGAGCTAGTAGTGCGAGCCCCCAAATCGTAACGAAACAATTAAAT
CAAACACCAAATGTTCAGACTCATCCAAAATTTCCAATGGAAGGTTTAGAACGCTACTTAGAAAATATCGAAAAAGATAT
TTTACTGAATGCATTAAACATGACGCATTGGAATCGAACTTTGGCAGCTAAAAAGCTGGGAATGACATTCCGTTCTTTGC
GCTATCGACTCAAAAAGTTTGGTTTGGATACCGAAATGGGAGAGGAAGTATAA

Domains

Predicted by InterproScan.

• Bacterial regulatory protein, Fis family (HTH_8) (420-460)

• Sigma-54 interaction domain (Sigma54_activat) (140-306)

• Response regulator receiver domain (Response_reg) (8-116)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Acinetobacter baumannii strain A118	86.047	100	0.866
pilR	Pseudomonas aeruginosa PAK	51.316	97.021	0.498