Detailed information NTG0444688

Bioinformatically predicted

Overview

• Name: comA/comEC
• Type: Machinery gene
• Locus tag: HLV59_RS04350
• Genome accession: NZ_CP053391
• Coordinates: 930933..933365 (+)
• Length: 810 a.a.
• NCBI ID: WP_171429403.1
• Uniprot ID: -
• Organism: Acinetobacter lactucae isolate QL-1
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
Prophage	930163..938049	930933..933365	within	0

Gene organization within MGE regions

Location: 930163..938049

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HLV59_RS04345	lolD	930163..930849 (+)	687	WP_057106242.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
HLV59_RS04350	comA/comEC	930933..933365 (+)	2433	WP_171429403.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
HLV59_RS04355	-	933318..934301 (-)	984	WP_081172989.1	lysophospholipid acyltransferase family protein	-
HLV59_RS04360	sppA	934435..935451 (+)	1017	WP_016146163.1	signal peptide peptidase SppA	-
HLV59_RS04365	-	935475..936284 (+)	810	WP_171429404.1	alpha/beta fold hydrolase	-
HLV59_RS04370	purN	936353..936982 (-)	630	WP_016146161.1	phosphoribosylglycinamide formyltransferase	-
HLV59_RS04375	purM	936979..938049 (-)	1071	WP_017385817.1	phosphoribosylformylglycinamidine cyclo-ligase	-

Sequence

Protein

• Length: 810 a.a.
• Molecular weight: 92645.25 Da
• Isoelectric Point: 9.2409

>NTDB_id=444688 HLV59_RS04350 WP_171429403.1 930933..933365(+) (comA/comEC) [Acinetobacter lactucae isolate QL-1]
MLKFILMGWIGGIAFMGIDIPLIMQYGWIGKVLIVIGFIFYIFKGHTFLNRPILKAIYCLVCAISLFIIGHQYAQHALNK
RLQLRQMQPKSLDIVVYVDRISEEKEDKTQQPVQVLGQSLHPVTWLLYLKNQKVNSAIDEPILQLGHYYRISGKTRPAHS
YAVAGAFDQEQWFIQRNIMSGFSVQHIEPLSSDEIYRLGYQHHLKDQQKFFNRQKLNIEKLRLKFRLMLKQSPLQNKGLL
LALLTGDESLLNDEIKNQFKELGISHLLAISGPHVLIFAIMLSWGLHQLLRRYYPQLYLHQPKQIWAMIPLCFGVLIYTA
FVGFEIPALRTLLSVVLFASLLLIKLPVRPFSLLVYSASLLLFFDPFSVLSAGFWLSYGSCFILLRIYQTIEQVPNLVST
SLLSRIILFSKILIESQGKIFIALCPLMLIFFQQISWVAPFTNIIAVPLLGGVIVPLNIFAACVWLIFNSFGNLLFQINN
VLISIVLTCFDLLEKLSLPLQGFSLTPLDLVCLSFVIIILFLPRGVLPKSWGLICCLPLVIPNKSSQQIQINIIDVGQGQ
AIFLQHPQQTWLIDTGGSYDEKAFSIGQNVVIPYLRQKGIKQLDHVILSHLDQDHSGAFPSIAQAFPIKQVISNELWTEQ
IKEPFTYCHQGQKWQYPQLDIEILWPMEKDLNLVSSNQNQYSCVVYIHLKQVTGYQNYLIMGDAGWEAEYQLMKEYPDLK
VDVLVLGHHGSKHSSAYDFLATLKPKLVIASAGFNNRYGHPSKEVLARVQALHIPFKSTVGQGTLSFVSRNHEMVLYTRR
FERTWLHRHL

Nucleotide

• Length: 2433 bp

>NTDB_id=444688 HLV59_RS04350 WP_171429403.1 930933..933365(+) (comA/comEC) [Acinetobacter lactucae isolate QL-1]
ATGTTAAAATTTATTTTAATGGGGTGGATTGGGGGTATTGCATTTATGGGGATAGATATCCCTCTCATCATGCAATATGG
TTGGATCGGTAAAGTATTAATCGTTATAGGTTTTATTTTTTATATTTTTAAGGGGCATACATTTTTAAATCGGCCCATAT
TAAAAGCCATTTACTGTCTAGTCTGCGCTATTAGTCTTTTTATTATAGGACATCAATATGCTCAGCATGCTTTAAATAAA
AGATTACAACTGCGACAAATGCAGCCTAAATCTTTAGATATAGTTGTGTATGTAGACCGCATAAGTGAAGAAAAAGAAGA
TAAGACACAGCAACCCGTTCAGGTACTAGGGCAGTCCTTACATCCCGTCACTTGGCTATTATATTTAAAAAATCAGAAAG
TAAACTCAGCCATAGATGAGCCAATATTACAATTAGGTCATTACTATCGAATTTCGGGTAAAACCAGACCAGCTCATAGT
TATGCAGTGGCAGGAGCTTTTGATCAAGAACAATGGTTTATTCAGCGAAATATAATGTCTGGTTTTAGTGTTCAGCATAT
TGAGCCTTTAAGCTCTGATGAAATTTATCGGTTGGGTTATCAACATCATTTAAAAGATCAACAAAAGTTTTTTAACCGAC
AAAAATTAAATATAGAAAAATTGCGTCTAAAATTTAGATTAATGCTGAAACAATCTCCTTTGCAGAATAAGGGACTATTA
TTAGCTTTATTAACAGGGGATGAAAGTCTCTTAAATGATGAGATTAAAAATCAATTTAAGGAATTAGGAATCTCTCATTT
ATTGGCGATTTCAGGGCCTCATGTGCTCATTTTTGCCATCATGTTGTCTTGGGGATTACATCAATTATTACGACGTTATT
ATCCGCAGCTTTATTTGCATCAACCTAAACAAATTTGGGCCATGATTCCATTATGTTTCGGTGTTTTGATTTATACCGCA
TTTGTTGGTTTTGAAATTCCCGCCTTAAGAACTTTACTTTCAGTAGTTTTATTTGCTTCTTTATTATTGATTAAACTGCC
TGTTAGGCCATTTTCACTGTTAGTTTACAGTGCAAGTCTACTTTTATTTTTCGATCCTTTCAGTGTTTTATCTGCAGGCT
TTTGGCTCTCTTATGGTTCCTGCTTTATTTTATTACGGATTTATCAAACTATTGAACAGGTTCCAAATCTTGTTTCAACG
AGTCTGTTATCTAGAATCATTCTTTTTAGTAAAATTTTAATTGAATCTCAAGGCAAAATATTTATTGCCTTATGTCCCTT
AATGTTGATTTTCTTTCAACAGATTTCATGGGTTGCTCCTTTTACAAATATTATTGCTGTTCCTTTACTCGGAGGAGTGA
TTGTTCCTTTAAACATTTTTGCAGCTTGTGTATGGCTTATTTTTAACTCATTCGGAAATTTACTTTTTCAAATTAATAAT
GTCCTGATTAGTATAGTACTGACATGTTTTGATCTTTTAGAAAAGCTATCATTACCATTACAAGGCTTTAGCCTGACACC
ACTTGATTTAGTTTGCCTTAGCTTCGTTATTATTATCTTATTTTTACCGCGTGGGGTTTTACCAAAATCTTGGGGGCTCA
TATGCTGTTTACCCTTGGTTATTCCGAATAAGTCGTCCCAGCAAATTCAAATCAATATTATAGATGTAGGACAGGGACAA
GCTATTTTCCTGCAGCACCCGCAGCAGACATGGCTAATCGATACGGGTGGGTCTTATGATGAAAAGGCTTTTAGTATTGG
TCAAAATGTGGTGATCCCATATTTACGTCAAAAAGGAATTAAACAATTAGATCACGTCATACTATCTCATCTTGACCAAG
ACCATAGCGGAGCATTTCCTTCTATCGCACAGGCTTTTCCTATTAAACAAGTCATATCAAATGAATTATGGACAGAACAA
ATTAAAGAACCATTTACTTATTGTCATCAAGGGCAAAAATGGCAATATCCACAATTAGATATTGAAATCCTTTGGCCTAT
GGAAAAGGATTTAAATTTAGTTTCTTCAAATCAAAATCAATATTCTTGTGTGGTTTATATTCACTTGAAACAGGTAACAG
GTTATCAAAATTATCTAATTATGGGTGATGCGGGGTGGGAAGCAGAATATCAACTCATGAAAGAATATCCAGATTTAAAG
GTAGACGTTTTGGTATTAGGTCATCATGGGAGTAAGCATAGTTCGGCTTATGATTTTTTAGCCACATTAAAGCCAAAGCT
TGTGATTGCCTCGGCTGGCTTTAATAATCGATATGGGCACCCAAGCAAAGAGGTTTTGGCGAGAGTACAAGCGCTTCATA
TTCCGTTTAAAAGCACAGTTGGGCAAGGAACATTAAGTTTTGTATCTCGCAATCATGAGATGGTTTTATACACTCGACGT
TTCGAGCGTACTTGGCTTCACAGGCATTTGTGA

Domains

Predicted by InterproScan.

• Metallo-beta-lactamase superfamily (Lactamase_B) (555-643)

• Domain of unknown function (DUF4131) (DUF4131) (29-188)

• Competence protein (Competence) (243-522)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA/comEC	Acinetobacter baumannii D1279779	70.297	99.753	0.701
comA/comEC	Acinetobacter baumannii strain A118	69.554	99.753	0.694
comA/comEC	Acinetobacter baylyi ADP1	49.02	100	0.494