Detailed information NTG0442779

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: HHM66_RS04275
• Genome accession: NZ_CP053074
• Coordinates: 852329..853558 (+)
• Length: 409 a.a.
• NCBI ID: WP_003054192.1
• Uniprot ID: -
• Organism: Streptococcus dysgalactiae subsp. equisimilis strain TPCH-A88
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 847329..858558

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HHM66_RS04250 (HHM66_04255)	-	847951..849228 (-)	1278	WP_015057516.1	hydroxymethylglutaryl-CoA reductase, degradative	-
HHM66_RS04255 (HHM66_04260)	-	849209..850390 (-)	1182	WP_015057517.1	hydroxymethylglutaryl-CoA synthase	-
HHM66_RS04260 (HHM66_04265)	-	850608..851447 (+)	840	WP_003054196.1	thymidylate synthase	-
HHM66_RS04265 (HHM66_04270)	-	851528..852025 (+)	498	WP_003054187.1	dihydrofolate reductase	-
HHM66_RS04270 (HHM66_04275)	-	852045..852215 (+)	171	WP_003054200.1	hypothetical protein	-
HHM66_RS04275 (HHM66_04280)	clpX	852329..853558 (+)	1230	WP_003054192.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
HHM66_RS04280 (HHM66_04285)	yihA	853568..854167 (+)	600	WP_003061604.1	ribosome biogenesis GTP-binding protein YihA/YsxC	-
HHM66_RS04285 (HHM66_04290)	-	854311..855054 (+)	744	WP_012766851.1	hypothetical protein	-
HHM66_RS04290 (HHM66_04295)	clpC	855111..857210 (-)	2100	WP_015057518.1	ATP-dependent Clp protease ATP-binding subunit	Regulator
HHM66_RS04295 (HHM66_04300)	-	857483..858346 (-)	864	WP_003059989.1	IS982 family transposase	-

Sequence

Protein

• Length: 409 a.a.
• Molecular weight: 45060.54 Da
• Isoelectric Point: 4.5866

>NTDB_id=442779 HHM66_RS04275 WP_003054192.1 852329..853558(+) (clpX) [Streptococcus dysgalactiae subsp. equisimilis strain TPCH-A88]
MAGNRTNDIKVYCSFCGKSQDEVKKIIAGNNVFICNECVALSQEIIKEELAEEVLADLTEVPKPKELLEVLNQYVVGQDR
AKRALSVAVYNHYKRVSFTESRDDEDVELQKSNILMIGPTGSGKTFLAQTLAKSLNVPFAIADATSLTEAGYVGEDVENI
LLKLIQAADYNVERAERGIIYVDEIDKIAKKGENVSITRDVSGEGVQQALLKIIEGTVASVPPQGGRKHPNQEMIQIDTK
NILFIVGGAFDGIEDIVKQRLGEKVIGFGQNSRKIDDNASYMQEIISEDIQKFGLIPEFIGRLPVVAALEQLNTSDLIQI
LTEPRNALVKQYQALLSYDGVELAFDKEALEAIANKAIERKTGARGLRSIIEETMLDIMFEIPSQEDVTKVRITKAAVEG
KSKPVLETA

Nucleotide

• Length: 1230 bp

>NTDB_id=442779 HHM66_RS04275 WP_003054192.1 852329..853558(+) (clpX) [Streptococcus dysgalactiae subsp. equisimilis strain TPCH-A88]
ATGGCAGGAAATCGTACAAACGATATTAAAGTATATTGCTCATTTTGTGGTAAGAGCCAAGACGAAGTCAAAAAAATTAT
TGCAGGGAATAATGTTTTTATCTGTAATGAATGTGTGGCTTTGTCACAAGAAATTATTAAAGAAGAGTTGGCAGAAGAAG
TGTTAGCTGACCTAACAGAAGTTCCAAAACCAAAAGAACTCCTTGAGGTTTTAAACCAGTATGTTGTTGGTCAAGATCGT
GCCAAACGTGCTTTATCAGTAGCTGTTTACAATCATTACAAACGCGTGTCATTCACGGAAAGTCGTGATGATGAAGATGT
TGAATTGCAAAAATCAAACATTTTAATGATTGGTCCAACAGGTTCAGGAAAGACTTTTCTCGCTCAAACCTTAGCTAAGA
GCTTAAATGTTCCTTTTGCGATTGCTGATGCAACCTCACTGACTGAAGCAGGGTATGTTGGAGAAGATGTGGAAAATATT
CTTCTCAAGCTTATCCAAGCAGCTGATTATAATGTGGAACGAGCAGAGCGTGGTATCATCTATGTCGATGAAATTGATAA
GATTGCTAAAAAAGGTGAAAATGTGTCCATCACACGTGATGTTTCTGGTGAGGGAGTTCAACAGGCCTTGCTAAAAATCA
TTGAAGGAACGGTTGCTAGTGTTCCTCCTCAAGGCGGTCGTAAGCATCCAAATCAGGAAATGATTCAAATTGATACCAAG
AATATCTTGTTTATTGTTGGGGGAGCCTTTGATGGCATTGAAGACATTGTCAAACAACGTTTAGGAGAAAAAGTCATTGG
TTTTGGTCAAAACAGCCGAAAAATCGATGACAATGCTTCTTATATGCAAGAGATTATTTCAGAAGATATCCAAAAATTTG
GTCTTATCCCAGAGTTTATTGGACGCTTGCCAGTCGTAGCTGCTCTTGAACAACTAAACACATCAGATTTGATTCAAATT
TTGACGGAACCAAGAAATGCCCTAGTCAAGCAATATCAGGCTCTTCTTTCTTACGATGGTGTCGAATTGGCATTTGATAA
GGAAGCCTTAGAAGCCATTGCAAATAAAGCCATTGAGCGTAAGACAGGCGCGCGTGGTCTTCGTTCTATTATCGAAGAAA
CGATGTTAGACATTATGTTTGAAATTCCAAGCCAAGAAGATGTCACAAAAGTGCGTATCACCAAGGCTGCTGTCGAAGGC
AAGTCAAAACCCGTTTTAGAGACAGCTTAA

Domains

Predicted by InterproScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (110-305)

• ClpX C4-type zinc finger (zf-C4_ClpX) (12-48)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (312-391)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	89.487	100	0.895
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	58.853	98.044	0.577