Detailed information NTG0442148

Bioinformatically predicted

Overview

• Name: ccpA
• Type: Regulator
• Locus tag: IRJ28_RS03045
• Genome accession: NZ_CP064096
• Coordinates: 594165..595169 (+)
• Length: 334 a.a.
• NCBI ID: WP_003229285.1
• Uniprot ID: P25144
• Organism: Bacillus subtilis strain N1142-3at
• Function: regulate comCDE transcription and transformation (predicted from homology) Competence regulation

Genomic Context

Location: 589165..600169

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IRJ28_RS03020	murC	589859..591157 (+)	1299	WP_003229274.1	UDP-N-acetylmuramate--L-alanine ligase	-
IRJ28_RS03025	ytxG	591319..591741 (+)	423	WP_003229276.1	DUF948 domain-containing protein	-
IRJ28_RS03030	ytxH	591772..592227 (+)	456	WP_004398549.1	YtxH domain-containing protein	-
IRJ28_RS03035	ytxJ	592251..592577 (+)	327	WP_003229280.1	bacillithiol system redox-active protein YtxJ	-
IRJ28_RS03040	aroX	592813..593889 (+)	1077	WP_003223454.1	bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase	-
IRJ28_RS03045	ccpA	594165..595169 (+)	1005	WP_003229285.1	catabolite control protein A	Regulator
IRJ28_RS03050	motP	595232..596050 (+)	819	WP_004398692.1	flagellar motor protein MotP	-
IRJ28_RS03055	motS	596040..596768 (+)	729	WP_003229290.1	flagellar motor protein MotS	-
IRJ28_RS03060	acuC	596779..597942 (-)	1164	WP_004398517.1	acetoin utilization protein AcuC	-
IRJ28_RS03065	acuB	597939..598583 (-)	645	WP_003229294.1	acetoin utilization AcuB family protein	-
IRJ28_RS03070	acuA	598610..599242 (-)	633	WP_003229296.1	acetoin utilization protein acetyltransferase AcuA	-

Sequence

Protein

• Length: 334 a.a.
• Molecular weight: 36940.34 Da
• Isoelectric Point: 5.0249

>NTDB_id=442148 IRJ28_RS03045 WP_003229285.1 594165..595169(+) (ccpA) [Bacillus subtilis strain N1142-3at]
MSNITIYDVAREANVSMATVSRVVNGNPNVKPTTRKKVLEAIERLGYRPNAVARGLASKKTTTVGVIIPDISSIFYSELA
RGIEDIATMYKYNIILSNSDQNMEKELHLLNTMLGKQVDGIVFMGGNITDEHVAEFKRSPVPIVLAASVEEQEETPSVAI
DYEQAIYDAVKLLVDKGHTDIAFVSGPMAEPINRSKKLQGYKRALEEANLPFNEQFVAEGDYTYDSGLEALQHLMSLDKK
PTAILSATDEMALGIIHAAQDQGLSIPEDLDIIGFDNTRLSLMVRPQLSTVVQPTYDIGAVAMRLLTKLMNKEPVEEHIV
ELPHRIELRKSTKS

Nucleotide

• Length: 1005 bp

>NTDB_id=442148 IRJ28_RS03045 WP_003229285.1 594165..595169(+) (ccpA) [Bacillus subtilis strain N1142-3at]
ATGAGCAATATTACGATCTACGATGTAGCGAGAGAAGCTAATGTAAGCATGGCAACCGTTTCCCGTGTCGTGAACGGCAA
CCCGAATGTAAAACCGACAACGAGGAAAAAAGTCTTGGAAGCCATTGAACGTCTCGGTTACCGTCCAAACGCGGTGGCAA
GAGGGCTGGCAAGTAAAAAAACAACAACTGTAGGTGTCATCATTCCCGATATCTCAAGCATTTTCTATTCAGAGCTTGCG
CGCGGAATTGAAGATATCGCGACAATGTATAAATACAATATTATTTTGAGCAACTCTGACCAAAACATGGAGAAAGAGCT
GCACTTGTTAAACACAATGCTCGGCAAACAAGTGGACGGCATCGTGTTTATGGGCGGAAACATTACGGACGAGCATGTGG
CGGAATTTAAGCGTTCTCCAGTGCCGATTGTACTTGCCGCTTCTGTAGAAGAGCAGGAGGAAACACCGTCAGTCGCTATC
GATTACGAACAGGCGATTTATGATGCCGTGAAGCTTTTGGTTGATAAAGGACATACAGACATCGCGTTCGTTTCCGGACC
AATGGCAGAACCGATCAACCGTTCGAAAAAACTCCAAGGCTACAAACGTGCGCTTGAAGAAGCGAACCTTCCGTTTAATG
AACAATTTGTAGCTGAAGGGGATTACACATATGATTCCGGACTCGAAGCACTGCAGCATCTGATGAGCCTGGATAAAAAA
CCGACAGCCATTCTTTCTGCAACTGATGAAATGGCACTCGGCATTATCCATGCCGCTCAGGATCAGGGCTTATCCATTCC
GGAGGATCTCGACATTATCGGTTTTGATAATACAAGATTAAGCCTCATGGTTCGTCCTCAGCTTTCAACAGTTGTTCAGC
CGACATATGATATCGGCGCCGTTGCGATGAGACTGCTGACGAAGCTCATGAATAAAGAGCCGGTTGAAGAGCATATCGTC
GAACTGCCGCACCGTATAGAGCTTAGAAAGTCAACCAAGTCATAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (5-50)

• Periplasmic binding protein-like domain (Peripla_BP_3) (171-332)

3D structure

• PDB: 1ZVV
• PDB: 2FEP
• PDB: 3OQM
• PDB: 3OQN
• PDB: 3OQO

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ccpA	Streptococcus pneumoniae D39	54.545	98.802	0.539
ccpA	Streptococcus gordonii str. Challis substr. CH1	53.636	98.802	0.53
ccpA	Lactococcus lactis subsp. lactis strain DGCC12653	50.602	99.401	0.503