Detailed information NTG0044161

Bioinformatically predicted

Overview

• Name: comEC
• Type: Machinery gene
• Locus tag: SAMSHR1132_RS07470
• Genome accession: NC_016941
• Coordinates: 1584690..1586891 (-)
• Length: 733 a.a.
• NCBI ID: WP_042355915.1
• Uniprot ID: -
• Organism: Staphylococcus argenteus
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1579690..1591891

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SAMSHR1132_RS07450 (SAMSHR1132_14230)	hemW	1579860..1580984 (-)	1125	WP_000216825.1	radical SAM family heme chaperone HemW	-
SAMSHR1132_RS07455 (SAMSHR1132_14240)	lepA	1581189..1583012 (-)	1824	WP_000356945.1	translation elongation factor 4	-
SAMSHR1132_RS07460 (SAMSHR1132_14250)	rpsT	1583358..1583609 (+)	252	WP_001274017.1	30S ribosomal protein S20	-
SAMSHR1132_RS07465 (SAMSHR1132_14260)	holA	1583659..1584633 (-)	975	WP_001282558.1	DNA polymerase III subunit delta	-
SAMSHR1132_RS07470 (SAMSHR1132_14270)	comEC	1584690..1586891 (-)	2202	WP_042355915.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
SAMSHR1132_RS07475 (SAMSHR1132_14280)	-	1586896..1587357 (-)	462	WP_000439693.1	ComE operon protein 2	-
SAMSHR1132_RS07480 (SAMSHR1132_14290)	comEA	1587449..1588165 (-)	717	WP_096001314.1	ComEA family DNA-binding protein	Machinery gene
SAMSHR1132_RS07485 (SAMSHR1132_14300)	-	1588205..1588921 (-)	717	WP_000084842.1	class I SAM-dependent methyltransferase	-
SAMSHR1132_RS07490 (SAMSHR1132_14310)	rsfS	1588924..1589277 (-)	354	WP_001088023.1	ribosome silencing factor	-
SAMSHR1132_RS07495 (SAMSHR1132_14320)	yqeK	1589278..1589862 (-)	585	WP_001019321.1	bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK	-
SAMSHR1132_RS07500 (SAMSHR1132_14330)	-	1589852..1590421 (-)	570	WP_000725169.1	nicotinate-nucleotide adenylyltransferase	-
SAMSHR1132_RS07505 (SAMSHR1132_14340)	yhbY	1590424..1590714 (-)	291	WP_000955238.1	ribosome assembly RNA-binding protein YhbY	-
SAMSHR1132_RS07510 (SAMSHR1132_14350)	aroE	1590719..1591525 (-)	807	WP_000666768.1	shikimate dehydrogenase	-

Sequence

Protein

• Length: 733 a.a.
• Molecular weight: 84968.96 Da
• Isoelectric Point: 10.0778

>NTDB_id=44161 SAMSHR1132_RS07470 WP_042355915.1 1584690..1586891(-) (comEC) [Staphylococcus argenteus]
MLYVALSMIVGVLWNSSKVLSTFLFILLLFIAYRKNKIVYAPISLFLIIFSSWYLHYSQQAVFNYINYIERNPQFNERAQ
VIQIQRQDSDTYKGRLSLKNEIYPFFLTDKKNFDLKKIESRNCIVKGQFKVNDNKFVTLKLQSIVVQSCLKSNQSNLIEK
HKQFIMNRIYDSGIKFPNRIMALITGDVKEINEQFKERVKEIGIYHLLAVSGSHIAAIVFLIYQPLKRLNFPLFVIKGIT
IIVLALFAQYTNYAPSAVRAIIMTTLVLLITKQIKIKGIQLLAFTFIIMFILNPLVVYDIGFQFSFIISFFIMLLFPFLQ
QLSKLQSLFIITFIAQLASFIVAIPNFHQLQWVGFLSNLIFVPYYSIILFPLSIVFFITSHFIVGLTPLNYFVDLSFNFH
DWLLDLFTRIKQSHFSIPKFNDWIFILFIISVYYIFWLLAKRKYRLVTFWTIIIMTLLITYPTNSHHKITMLNVGQGDSI
LYEGGKNQNVLIDTGGKVINDTKQPSFSISKYHILPTLNERGINELEYLILTHPHNDHIGEVEYIISHIKIKHIVIYNKG
YSSKTLLLLSKLSHKYNIKLMDVRQVSSFKLGDSSFQFFDSFIPNSRDKNEYSIITMITYQNKKALLMGDASKNNESLLL
KKYNLPEIDILKVGHHGSKTSSSKEFIEVIRPKISLISSGKNNMYHLPNIEVVKRLQGIRSRIYNSQQNGEVTIDLDENL
KVDSNSYGNASGL

Nucleotide

• Length: 2202 bp

>NTDB_id=44161 SAMSHR1132_RS07470 WP_042355915.1 1584690..1586891(-) (comEC) [Staphylococcus argenteus]
TTGCTGTATGTCGCATTATCAATGATTGTAGGAGTACTTTGGAATTCTAGCAAAGTGCTCTCTACATTTCTTTTCATTTT
ACTTTTGTTTATTGCTTATCGTAAAAATAAAATAGTTTATGCTCCTATTTCTCTCTTTTTAATCATTTTTTCCTCATGGT
ATTTACATTATTCGCAACAAGCAGTATTTAATTATATCAATTATATTGAACGTAATCCTCAGTTTAATGAGCGTGCTCAA
GTAATCCAAATTCAACGTCAAGATAGTGACACATATAAAGGTAGGTTGAGTTTAAAGAATGAAATATATCCTTTCTTTTT
AACAGATAAAAAGAATTTTGATTTAAAGAAAATTGAAAGTCGTAATTGTATTGTTAAAGGACAATTCAAAGTTAATGACA
ACAAGTTTGTAACTCTTAAATTACAAAGTATAGTTGTACAAAGCTGTCTAAAATCGAACCAGTCTAATTTAATTGAGAAA
CATAAACAGTTTATAATGAATCGAATTTATGATTCGGGTATTAAGTTTCCAAATCGTATTATGGCATTGATTACTGGTGA
CGTAAAAGAAATTAATGAGCAATTTAAGGAACGTGTTAAAGAGATAGGTATATATCATTTGCTGGCAGTAAGTGGCTCGC
ATATAGCTGCAATTGTATTCTTAATTTACCAACCTTTAAAACGATTAAATTTTCCTTTATTTGTCATTAAAGGAATTACA
ATCATTGTATTAGCTTTGTTTGCTCAATACACAAATTATGCACCTAGTGCGGTAAGAGCTATAATAATGACAACACTAGT
ACTACTTATTACTAAGCAAATTAAAATAAAGGGTATTCAGCTATTAGCATTTACTTTTATAATTATGTTTATTTTGAATC
CACTAGTTGTTTATGATATTGGATTTCAATTTTCATTCATCATTTCATTTTTTATTATGCTACTTTTTCCTTTTTTACAG
CAATTGTCAAAGTTACAATCATTATTCATAATTACTTTTATTGCACAATTAGCTTCATTTATCGTTGCCATTCCTAACTT
TCATCAACTTCAATGGGTGGGTTTTTTATCTAATTTGATTTTTGTACCGTACTATTCGATTATACTGTTTCCTCTATCAA
TTGTATTCTTTATTACAAGCCATTTTATTGTGGGCTTAACGCCGCTAAATTACTTTGTTGACCTAAGTTTCAATTTTCAT
GATTGGTTACTAGACCTATTCACTCGAATCAAGCAATCACACTTTTCTATTCCTAAGTTTAATGATTGGATATTTATATT
GTTTATAATTTCTGTTTATTACATATTTTGGTTATTGGCTAAACGTAAATATAGATTGGTTACGTTTTGGACTATAATTA
TTATGACATTATTAATAACGTATCCAACAAATTCACATCACAAAATTACAATGTTAAATGTGGGGCAGGGAGACAGTATT
TTATATGAAGGCGGTAAGAACCAAAATGTCTTGATTGATACAGGTGGAAAAGTGATTAATGATACTAAACAACCTAGTTT
TTCAATTTCTAAATATCATATTTTACCAACGCTAAATGAAAGAGGGATAAACGAATTAGAGTATTTAATTTTAACACATC
CACACAATGACCATATTGGTGAAGTAGAATATATTATTAGTCATATTAAAATTAAGCATATAGTGATATACAATAAAGGA
TATAGTAGTAAAACATTGTTGTTATTATCAAAATTAAGCCATAAGTATAACATTAAACTTATGGATGTAAGACAAGTTAG
TAGTTTTAAACTTGGGGATAGTAGTTTTCAATTTTTTGATAGTTTTATTCCAAATAGCCGAGATAAAAATGAATATTCGA
TTATTACTATGATTACATATCAAAATAAAAAAGCTTTATTAATGGGTGATGCTAGTAAAAATAATGAATCTTTACTATTA
AAGAAATATAATTTGCCAGAGATTGATATTTTAAAAGTAGGACATCATGGAAGTAAGACAAGTAGTTCTAAAGAATTTAT
AGAGGTGATTAGGCCTAAAATAAGTTTGATTTCTTCTGGGAAGAACAATATGTATCATCTACCTAACATAGAAGTTGTTA
AACGATTGCAAGGTATTCGCAGTCGCATTTACAATAGTCAACAAAACGGTGAAGTTACAATAGACTTAGATGAAAATTTA
AAAGTTGATTCAAACTCTTATGGAAATGCAAGTGGTTTATAG

Domains

Predicted by InterproScan.

• Competence protein (Competence) (183-441)

• Metallo-beta-lactamase superfamily (Lactamase_B) (474-679)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC	Staphylococcus aureus N315	95.771	100	0.958
comEC	Staphylococcus aureus MW2	95.362	100	0.954