Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   HIN88_RS03170 Genome accession   NZ_CP051866
Coordinates   658598..658981 (+) Length   127 a.a.
NCBI ID   WP_064192995.1    Uniprot ID   -
Organism   Acinetobacter baumannii strain Ab-C63     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 653598..663981
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HIN88_RS03160 (HIN88_03160) - 656499..657617 (-) 1119 WP_064192993.1 efflux RND transporter periplasmic adaptor subunit -
  HIN88_RS03165 (HIN88_03165) - 657677..658315 (-) 639 WP_064194494.1 hypothetical protein -
  HIN88_RS03170 (HIN88_03170) pilG 658598..658981 (+) 384 WP_064192995.1 twitching motility response regulator PilG Regulator
  HIN88_RS03175 (HIN88_03175) - 659005..659367 (+) 363 WP_000101096.1 PleD family two-component system response regulator -
  HIN88_RS03180 (HIN88_03180) - 659428..659964 (+) 537 WP_000729762.1 chemotaxis protein CheW -
  HIN88_RS03185 (HIN88_03185) - 660011..662089 (+) 2079 WP_000505931.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14214.26 Da        Isoelectric Point: 4.5762

>NTDB_id=441178 HIN88_RS03170 WP_064192995.1 658598..658981(+) (pilG) [Acinetobacter baumannii strain Ab-C63]
MEDAFQNLKVMVIDDSKTIRRTAETLLQREGCEVITAVDGFEALSKIAEANPDIVFVDIMMPRLDGYQTCALIKNSQNYQ
NIPIIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLNAIRNHVSS

Nucleotide


Download         Length: 384 bp        

>NTDB_id=441178 HIN88_RS03170 WP_064192995.1 658598..658981(+) (pilG) [Acinetobacter baumannii strain Ab-C63]
ATGGAAGATGCATTCCAAAATCTGAAAGTAATGGTTATTGATGACTCAAAAACTATTCGCCGTACCGCAGAAACTCTATT
GCAACGCGAAGGTTGCGAAGTGATTACTGCTGTCGATGGATTTGAAGCTTTATCTAAAATTGCTGAAGCGAATCCGGATA
TTGTTTTTGTAGATATCATGATGCCTCGTTTAGACGGTTATCAAACTTGTGCTTTGATTAAGAACTCTCAAAATTATCAG
AACATTCCCATTATCATGCTCTCTAGTAAAGATGGTTTATTTGATCAGGCAAAAGGGCGTGTGGTAGGTTCAGATGAATA
CTTGACGAAACCTTTTAGCAAAGATGAATTGCTAAATGCGATTCGTAATCATGTAAGTTCATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

99.213

100

0.992
  vicR Streptococcus mutans UA159

43.59

92.126

0.402
  pilH Synechocystis sp. PCC 6803

40.708

88.976

0.362