Detailed information NTG0439663

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: HG575_RS01925
• Genome accession: NZ_CP051540
• Coordinates: 402857..403657 (+)
• Length: 266 a.a.
• NCBI ID: WP_024368958.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain LIM-002
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 397857..408657

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HG575_RS01890 (HG575_01890)	pseH	398357..398899 (+)	543	WP_202248730.1	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	-
HG575_RS01895 (HG575_01895)	-	398832..399770 (-)	939	WP_202248732.1	tetraacyldisaccharide 4'-kinase	-
HG575_RS01900 (HG575_01900)	-	399767..400549 (-)	783	WP_202248734.1	NAD+ synthase	-
HG575_RS01910 (HG575_01910)	ilvC	400798..401790 (+)	993	WP_202248736.1	ketol-acid reductoisomerase	-
HG575_RS01915 (HG575_01915)	minD	401814..402620 (+)	807	WP_001019048.1	septum site-determining protein MinD	-
HG575_RS01920 (HG575_01920)	minE	402617..402850 (+)	234	WP_000051414.1	cell division topological specificity factor MinE	-
HG575_RS01925 (HG575_01925)	dprA	402857..403657 (+)	801	WP_024368958.1	DNA-processing protein DprA	Machinery gene
HG575_RS01930 (HG575_01930)	dprB	403654..404058 (+)	405	WP_202248738.1	Holliday junction resolvase RuvX	Machinery gene
HG575_RS01935 (HG575_01935)	-	404188..404868 (+)	681	WP_202248740.1	tetratricopeptide repeat protein	-
HG575_RS01940 (HG575_01940)	-	405063..405401 (+)	339	WP_202248742.1	hypothetical protein	-
HG575_RS01945 (HG575_01945)	-	405385..405945 (+)	561	WP_202248744.1	hypothetical protein	-
HG575_RS01950 (HG575_01950)	-	406079..406960 (-)	882	WP_202248746.1	RluA family pseudouridine synthase	-
HG575_RS01955 (HG575_01955)	recJ	406960..408510 (-)	1551	WP_202248748.1	single-stranded-DNA-specific exonuclease RecJ	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29834.70 Da
• Isoelectric Point: 7.7999

>NTDB_id=439663 HG575_RS01925 WP_024368958.1 402857..403657(+) (dprA) [Helicobacter pylori strain LIM-002]
MKSNFQYSALENIPKAFDILKDPPKKLYCVGDTKLLEAPLKVAIIGTRRPTPYSKQHTITLARELAKNGAVIVSGGALGV
DIIAQENALPKTIMLSPCSLDLIYPTNNHKVIQEIAQNGLILSEYEKDFMPVKGSFLARNRLVIALSDTVIIPQADLKSG
SMSSARLAQKYQKPLFVLPHRLNESDGTNELLEKGQAQGIFNIQNFINTLLKDYHLKEMPEMEDEFLEYCAKNPSYEEAY
LKFGDKLLEYELLGKIKRINHLVVLA

Nucleotide

• Length: 801 bp

>NTDB_id=439663 HG575_RS01925 WP_024368958.1 402857..403657(+) (dprA) [Helicobacter pylori strain LIM-002]
ATGAAAAGTAATTTCCAATACAGTGCGTTAGAAAATATCCCTAAAGCCTTTGACATTCTCAAAGACCCCCCTAAAAAACT
CTATTGTGTGGGCGATACCAAGCTTTTAGAAGCGCCTTTAAAAGTGGCTATCATAGGCACAAGAAGACCCACCCCTTATA
GCAAGCAACACACGATCACTCTAGCCAGAGAGCTTGCTAAAAATGGTGCGGTTATTGTGAGCGGGGGAGCGTTGGGCGTG
GATATTATCGCTCAAGAAAACGCCTTACCAAAAACCATCATGCTTTCGCCTTGCAGTTTGGATTTGATCTATCCTACGAA
CAACCATAAAGTGATCCAAGAAATCGCGCAAAACGGCCTGATTTTAAGCGAATATGAAAAGGATTTCATGCCCGTTAAAG
GCTCTTTTTTAGCGAGAAACCGCCTAGTGATCGCTTTAAGCGATACGGTGATTATCCCCCAAGCGGATTTAAAAAGCGGT
TCTATGAGCAGCGCGAGATTAGCCCAAAAATACCAAAAACCCTTATTTGTTTTGCCTCATCGCTTAAATGAAAGCGATGG
CACTAATGAGCTTTTAGAAAAAGGGCAGGCTCAAGGGATATTTAATATTCAAAATTTTATAAACACCCTTTTAAAAGATT
ATCATTTAAAAGAAATGCCTGAAATGGAAGATGAATTTTTAGAATATTGTGCGAAAAACCCTAGCTATGAAGAGGCGTAT
CTCAAATTTGGGGATAAGCTTTTAGAATACGAGCTGTTGGGTAAGATCAAGCGCATCAATCATCTCGTGGTGTTAGCATG
A

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (12-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	96.617	100	0.966
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	47.788	84.962	0.406