Detailed information NTG0439641

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: HG576_RS01665
• Genome accession: NZ_CP051539
• Coordinates: 346257..347057 (+)
• Length: 266 a.a.
• NCBI ID: WP_202139015.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain LIM-003
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 341257..352057

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HG576_RS01630 (HG576_01630)	pseH	341757..342299 (+)	543	WP_000742672.1	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	-
HG576_RS01635 (HG576_01635)	-	342232..343170 (-)	939	WP_000833925.1	tetraacyldisaccharide 4'-kinase	-
HG576_RS01640 (HG576_01640)	-	343167..343949 (-)	783	WP_202139013.1	NAD+ synthase	-
HG576_RS01650 (HG576_01650)	ilvC	344198..345190 (+)	993	WP_202139014.1	ketol-acid reductoisomerase	-
HG576_RS01655 (HG576_01655)	minD	345214..346020 (+)	807	WP_001019048.1	septum site-determining protein MinD	-
HG576_RS01660 (HG576_01660)	minE	346017..346250 (+)	234	WP_000051418.1	cell division topological specificity factor MinE	-
HG576_RS01665 (HG576_01665)	dprA	346257..347057 (+)	801	WP_202139015.1	DNA-processing protein DprA	Machinery gene
HG576_RS01670 (HG576_01670)	dprB	347054..347458 (+)	405	WP_202139016.1	Holliday junction resolvase RuvX	Machinery gene
HG576_RS01675 (HG576_01675)	-	347593..348264 (+)	672	WP_202139017.1	tetratricopeptide repeat protein	-
HG576_RS01680 (HG576_01680)	-	348379..348717 (+)	339	WP_078249626.1	hypothetical protein	-
HG576_RS01685 (HG576_01685)	-	348701..349261 (+)	561	WP_001035890.1	hypothetical protein	-
HG576_RS01690 (HG576_01690)	-	349405..350286 (-)	882	WP_078245179.1	RluA family pseudouridine synthase	-
HG576_RS01695 (HG576_01695)	recJ	350286..351836 (-)	1551	WP_202139018.1	single-stranded-DNA-specific exonuclease RecJ	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29886.74 Da
• Isoelectric Point: 7.7772

>NTDB_id=439641 HG576_RS01665 WP_202139015.1 346257..347057(+) (dprA) [Helicobacter pylori strain LIM-003]
MKSNFQYSALENIPKAFDILKDPPKQLYCVGDTKLLESPLKVAIIGTRRPTPYSKQHTITLARELAKNGAVIVSGGALGV
DIIAQENALPKTIMLSPCSLDFIYPTNNHKVIQEIAQNGLILSEYEKDFMPIKGSFLARNRLVIALSDVVIIPQADLQSG
SMSSARLAQKYQKPLFVLPQRLNESDGTNELLEKGQAQGIFNIQNFINTLLKDYHLKEMPEMKDEFLEYCAKNPSYEEAY
LKFGDKLLEYELLGKIKRINHLVVLA

Nucleotide

• Length: 801 bp

>NTDB_id=439641 HG576_RS01665 WP_202139015.1 346257..347057(+) (dprA) [Helicobacter pylori strain LIM-003]
ATGAAAAGTAATTTCCAATACAGTGCACTAGAGAATATCCCTAAAGCCTTTGACATTCTCAAAGACCCCCCTAAACAGCT
CTATTGTGTGGGCGATACCAAGCTTTTAGAATCGCCTTTAAAAGTGGCTATCATAGGCACAAGAAGACCCACCCCTTACA
GCAAGCAACACACCATCACTCTAGCCAGAGAGCTTGCTAAAAATGGCGCGGTTATTGTGAGCGGGGGAGCGTTAGGCGTG
GATATTATCGCTCAAGAAAACGCCTTACCAAAAACCATCATGCTTTCGCCTTGCAGTTTGGATTTCATCTATCCTACGAA
CAATCATAAAGTGATCCAAGAAATCGCGCAAAACGGCTTGATTTTAAGCGAATATGAAAAAGACTTCATGCCCATTAAAG
GCTCTTTTTTAGCGAGAAACCGCCTGGTGATCGCTTTAAGCGATGTAGTGATTATCCCACAAGCGGATTTACAAAGCGGC
TCTATGAGCAGCGCGAGATTAGCCCAAAAATACCAAAAACCCTTATTCGTTTTGCCCCAACGCTTGAACGAGAGCGATGG
CACTAATGAGCTTTTAGAAAAAGGGCAGGCTCAAGGGATATTTAATATTCAAAATTTTATAAACACCCTTTTAAAAGACT
ACCATTTAAAAGAAATGCCTGAAATGAAAGATGAATTTTTAGAATATTGTGCGAAAAACCCTAGCTATGAAGAGGCGTAT
CTCAAATTTGGGGATAAACTTTTAGAATACGAGCTGTTGGGTAAGATCAAGCGCATCAATCATCTCGTGGTGTTAGCATG
A

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (12-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	96.992	100	0.97
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	47.788	84.962	0.406