Detailed information NTG0439559

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: HG582_RS01685
• Genome accession: NZ_CP051534
• Coordinates: 348728..349528 (+)
• Length: 266 a.a.
• NCBI ID: WP_202144111.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain LIM-009
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 343728..354528

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HG582_RS01650 (HG582_01655)	pseH	344218..344760 (+)	543	WP_202144107.1	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	-
HG582_RS01655 (HG582_01660)	-	344693..345631 (-)	939	WP_202144108.1	tetraacyldisaccharide 4'-kinase	-
HG582_RS01660 (HG582_01665)	-	345638..346420 (-)	783	WP_202144109.1	NAD+ synthase	-
HG582_RS01670 (HG582_01675)	ilvC	346669..347661 (+)	993	WP_202144110.1	ketol-acid reductoisomerase	-
HG582_RS01675 (HG582_01680)	minD	347685..348491 (+)	807	WP_001019048.1	septum site-determining protein MinD	-
HG582_RS01680 (HG582_01685)	minE	348488..348721 (+)	234	WP_000051414.1	cell division topological specificity factor MinE	-
HG582_RS01685 (HG582_01690)	dprA	348728..349528 (+)	801	WP_202144111.1	DNA-processing protein DprA	Machinery gene
HG582_RS01690 (HG582_01695)	dprB	349525..349929 (+)	405	WP_197301101.1	Holliday junction resolvase RuvX	Machinery gene
HG582_RS01695 (HG582_01700)	-	350061..350852 (+)	792	WP_202144112.1	tetratricopeptide repeat protein	-
HG582_RS01700 (HG582_01705)	-	351037..351375 (+)	339	WP_079353435.1	hypothetical protein	-
HG582_RS01705 (HG582_01710)	-	351359..351919 (+)	561	WP_202144113.1	hypothetical protein	-
HG582_RS01710 (HG582_01715)	-	352050..352931 (-)	882	WP_202144114.1	RluA family pseudouridine synthase	-
HG582_RS01715 (HG582_01720)	recJ	352931..354481 (-)	1551	WP_202144115.1	single-stranded-DNA-specific exonuclease RecJ	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29843.71 Da
• Isoelectric Point: 7.8675

>NTDB_id=439559 HG582_RS01685 WP_202144111.1 348728..349528(+) (dprA) [Helicobacter pylori strain LIM-009]
MKSNFQYSALENIPKAFDMLKDPPKKLYCVGDTKLLEAPLKVAIIGTRRPTPYSKQHTITLARELAKNGAVIVSGGALGV
DIIAQENALPTTIMLSPCSLDLIYPTNNHKVIQEIAQNGLILSEYEKDFMPIKGSFLARNRLVIALSDAVIIPQADLQSG
SMSSARLAQKYQKPLFVLPQRLNESDGTNELLEKGQAQGIFNIQNFINTLLKDYHLKEMPEMKDEFLEYFAKNPSYEEAY
LKFGDKLLEYELLGKIKRINHLVVLA

Nucleotide

• Length: 801 bp

>NTDB_id=439559 HG582_RS01685 WP_202144111.1 348728..349528(+) (dprA) [Helicobacter pylori strain LIM-009]
ATGAAAAGTAATTTCCAATACAGCGCGCTAGAAAATATCCCTAAAGCCTTTGACATGCTCAAAGACCCCCCTAAAAAACT
CTATTGTGTGGGCGATACCAAGCTTTTAGAAGCGCCTTTAAAAGTGGCTATCATAGGCACAAGAAGACCCACCCCTTACA
GCAAGCAACACACCATCACTCTAGCCAGAGAGCTTGCTAAAAATGGCGCGGTTATTGTGAGCGGGGGAGCGTTAGGCGTG
GATATTATCGCTCAAGAAAACGCCTTACCAACAACGATCATGCTTTCGCCTTGCAGTTTGGATTTGATCTATCCTACGAA
TAACCATAAAGTGATCCAAGAAATCGCGCAAAACGGCTTGATTTTAAGCGAATATGAAAAGGATTTCATGCCTATTAAAG
GCTCTTTTTTAGCGAGAAACCGCCTGGTGATTGCTTTAAGCGATGCGGTGATTATCCCCCAAGCGGATTTACAAAGCGGC
TCTATGAGTAGCGCGAGATTAGCCCAGAAATACCAAAAACCCTTATTTGTTTTACCCCAACGCTTGAATGAAAGCGATGG
CACTAATGAGCTTTTAGAAAAAGGGCAGGCTCAAGGGATATTTAATATTCAAAATTTTATAAACACCCTTTTAAAAGACT
ACCATTTAAAAGAAATGCCTGAAATGAAAGATGAATTTTTAGAATATTTTGCGAAAAACCCTAGCTATGAAGAAGCGTAT
CTCAAATTTGGGGATAAGCTTTTAGAATACGAGCTGTTGGGTAAGATCAAGCGCATCAATCATCTCGTGGTGTTAGCATG
A

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (11-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	95.489	100	0.955
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	47.788	84.962	0.406