Detailed information NTG0439378

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: HG558_RS04865
• Genome accession: NZ_CP051509
• Coordinates: 1016545..1017345 (-)
• Length: 266 a.a.
• NCBI ID: WP_202166420.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain ASHA-009
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1011545..1022345

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HG558_RS04815 (HG558_04800)	-	1012313..1013098 (-)	786	WP_202166417.1	hypothetical protein	-
HG558_RS04820 (HG558_04805)	-	1013098..1013485 (-)	388	Protein_946	DUF1294 domain-containing protein	-
HG558_RS07925 (HG558_04810)	-	1013639..1013824 (-)	186	WP_014534380.1	hypothetical protein	-
HG558_RS07930	-	1013917..1014093 (-)	177	WP_014534379.1	hypothetical protein	-
HG558_RS08045 (HG558_04820)	-	1014114..1014506 (-)	393	Protein_949	lysozyme	-
HG558_RS04845 (HG558_04825)	-	1014518..1015084 (-)	567	WP_202133084.1	hypothetical protein	-
HG558_RS04850 (HG558_04830)	-	1015068..1015406 (-)	339	WP_202135745.1	hypothetical protein	-
HG558_RS04855 (HG558_04835)	-	1015536..1015913 (-)	378	WP_338402077.1	tetratricopeptide repeat protein	-
HG558_RS08050	-	1015947..1016015 (-)	69	Protein_953	sel1 repeat family protein	-
HG558_RS04860 (HG558_04840)	dprB	1016144..1016548 (-)	405	WP_202166419.1	Holliday junction resolvase RuvX	Machinery gene
HG558_RS04865 (HG558_04845)	dprA	1016545..1017345 (-)	801	WP_202166420.1	DNA-processing protein DprA	Machinery gene
HG558_RS04870 (HG558_04850)	minE	1017357..1017590 (-)	234	WP_000051411.1	cell division topological specificity factor MinE	-
HG558_RS04875 (HG558_04855)	minD	1017587..1018393 (-)	807	WP_187934758.1	septum site-determining protein MinD	-
HG558_RS04880 (HG558_04860)	ilvC	1018412..1019404 (-)	993	WP_202166421.1	ketol-acid reductoisomerase	-
HG558_RS04890 (HG558_04870)	-	1019651..1020433 (+)	783	WP_202166422.1	NAD+ synthase	-
HG558_RS04895 (HG558_04875)	-	1020430..1021368 (+)	939	WP_000833954.1	tetraacyldisaccharide 4'-kinase	-
HG558_RS04900 (HG558_04880)	pseH	1021301..1021843 (-)	543	WP_202166423.1	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29747.69 Da
• Isoelectric Point: 8.1130

>NTDB_id=439378 HG558_RS04865 WP_202166420.1 1016545..1017345(-) (dprA) [Helicobacter pylori strain ASHA-009]
MKSNFQYSALENIPKAFDILKDPPKKLYCVGDIKLLDAPLKVAIIGTRRPTPYSKQHTITLARELAKNGAVIVSGGALGV
DIIAQENALPKTIMLSPCSLDFIYPTNNHKVIQEIAQNGLILSEYEKDFMPVKGSFLARNRLVIALSDAVIIPQADLKSG
SMSSARLAQKYQKPLFVLPQCLNESDGTNELLEKGQAQGIFNIQNFINTLLKDHHLKEMPEMKDEFLEYCAKNPSYEEAY
LKFGDKLLEYELLGKIKRINHIVVLA

Nucleotide

• Length: 801 bp

>NTDB_id=439378 HG558_RS04865 WP_202166420.1 1016545..1017345(-) (dprA) [Helicobacter pylori strain ASHA-009]
ATGAAAAGCAACTTCCAATACAGCGCGCTAGAGAACATCCCTAAAGCCTTTGACATTCTCAAAGACCCCCCTAAAAAGCT
CTATTGTGTGGGCGATATAAAGCTTTTAGACGCGCCTTTAAAAGTGGCTATCATCGGCACGAGAAGACCCACCCCTTATA
GCAAACAACACACCATCACTCTAGCCAGAGAGCTTGCTAAAAATGGCGCGGTTATTGTGAGCGGAGGAGCGTTAGGCGTG
GATATTATCGCTCAAGAAAACGCCTTACCAAAAACCATTATGCTTTCGCCTTGCAGTTTGGATTTTATCTATCCCACGAA
CAACCATAAAGTGATCCAAGAAATCGCGCAAAACGGCTTGATTTTAAGCGAATATGAAAAGGATTTTATGCCTGTTAAAG
GCTCTTTTTTAGCCAGAAACCGCCTGGTGATCGCTTTAAGCGATGCGGTGATTATCCCCCAAGCGGATTTAAAAAGCGGC
TCTATGAGCAGCGCGAGATTAGCCCAAAAGTATCAAAAACCCTTATTTGTTTTGCCCCAGTGCCTGAATGAGAGCGATGG
CACTAATGAGCTTTTAGAAAAAGGGCAGGCTCAAGGGATATTCAATATTCAAAATTTTATAAACACCCTTTTAAAAGACC
ACCATTTAAAAGAAATGCCTGAAATGAAAGACGAATTTTTGGAATATTGTGCCAAAAACCCGAGCTATGAAGAGGCGTAT
CTCAAATTTGGGGACAAGCTTTTAGAATACGAGCTGTTGGGTAAGATTAAACGCATCAATCATATCGTGGTGTTAGCGTG
A

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (12-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	96.617	100	0.966
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	48.23	84.962	0.41